Pairwise Alignments

Query, 299 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 307 a.a., Transcriptional regulator, LysR family from Pseudomonas fluorescens FW300-N2E2

 Score =  140 bits (354), Expect = 3e-38
 Identities = 91/300 (30%), Positives = 152/300 (50%), Gaps = 9/300 (3%)

Query: 7   ETMKLDDLNLFRLVVENGSYTSTSKKTMIPVATITRRIQALEDSLNLRLLNRHARKLTLT 66
           E ++L  + LF L  E GS+T+ ++   +  A ++R I  LE+ L  RL  R  R + LT
Sbjct: 6   EDLQLGSIELFCLAAEAGSFTAAAQLAGVTPAAVSRSIFRLEERLGSRLFVRTTRSIRLT 65

Query: 67  EAGERFYKDCSPLLERLASMTEEITDECRGASGRIRISAPSNLTKRMMMPMFNAFMEKYP 126
           EAG+ +++ C   L +L    +E+       SG++RIS P+      ++P+  AF   YP
Sbjct: 66  EAGKTYFEQCRQALTQLVEAQQEMMGAQSVPSGQLRISLPTTYGHHRILPLLPAFRALYP 125

Query: 127 DIHIELMMSNQADDLDPTEWDVIFRVGPQRDSSLIARKIGEVKDILVASPQYLSSHPQPT 186
            + ++L +SN+  D     +D+  RV  Q DSS+IAR + +    +VASP YL     P 
Sbjct: 126 QVSVDLHLSNRNIDFVAEGYDLAIRVRAQPDSSMIARLLEDANLAVVASPDYLRKAGTPQ 185

Query: 187 HAEELHQHQLLK-----GYPLLKWQLTNSQGETVVNSDRGRFQAS--ALNVVRSACSEGL 239
             E+L  H+ ++         + W L    G+      +G +  S   L  V  A   G 
Sbjct: 186 TLEDLDDHECIQFELPSSGRRISW-LFKVDGKEKEVFGQGNYCCSDDVLGGVTLA-KHGA 243

Query: 240 GITLMPDVMLREFLEDGSLVQVLSDWSSNPRDIYMLYNHKDHQPEKVRLFIDFVIGYHLQ 299
           G+      ++++ L +G LV+VL+ ++   R   +LY H  + P++VR F+DF++ Y  Q
Sbjct: 244 GLFQTYKFIVKQELANGQLVEVLAPFAGRSRPFTLLYPHGRYVPQRVRAFVDFLLQYREQ 303