Pairwise Alignments

Query, 299 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 332 a.a., Transcriptional regulator, LysR family from Pseudomonas fluorescens FW300-N2E2

 Score =  148 bits (373), Expect = 2e-40
 Identities = 91/290 (31%), Positives = 155/290 (53%), Gaps = 7/290 (2%)

Query: 11  LDDLNLFRLVVENGSYTSTSKKTMIPVATITRRIQALEDSLNLRLLNRHARKLTLTEAGE 70
           L ++ +F  VVE GS++  ++++    + I+R I  LE +L  RLL R  RKL L++ GE
Sbjct: 10  LAEMAIFVKVVETGSFSEAARQSGSSPSAISRSISRLEKALATRLLQRTTRKLRLSDGGE 69

Query: 71  RFYKDCSPLLERLASMTEEITDECRGASGRIRISAPSNLTKRMMMPMFNAFMEKYPDIHI 130
             +K C  ++    S+ E      + A GRIRIS P  + + ++ P    F+ +YP + +
Sbjct: 70  EVFKRCQEMVAAARSVMEISGQFTQEAEGRIRISVPKAVGRFVIHPHMPEFLRRYPKVDV 129

Query: 131 ELMMSNQADDLDPTEWDVIFRVGPQRDSSLIARKIGEVKDILVASPQYLSSHPQPTHAEE 190
           EL + ++  DL     D+  R+  Q    L+ R++  +  +L A+PQYL+ H  P H  +
Sbjct: 130 ELFLEDRQVDLIDDHVDLAIRITDQPPVGLVGRQLLTIDHLLCATPQYLAEHGMPKHPHD 189

Query: 191 LHQHQ--LLKGYPL-LKWQLTNSQGETVVNSDRGRFQASALNVVRSACSEGLGITLMPDV 247
           L +H    L   P   +W+      ++V  S RGR+ A+   V   A  + +GI  +P  
Sbjct: 190 LLEHSCIYLGATPNDARWKFKKG-SKSVTVSVRGRYAANHTGVRLGAVLQHIGIGSLPYF 248

Query: 248 MLREFLEDGSLVQVLSDW---SSNPRDIYMLYNHKDHQPEKVRLFIDFVI 294
             R  LE G +VQVL+DW   +S    +++L++   + P K+R+FID+++
Sbjct: 249 TARHALEQGLIVQVLADWTFLASYHGGLWLLHSPTRYLPPKLRVFIDYLV 298