Pairwise Alignments

Query, 299 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 303 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella amazonensis SB2B

 Score =  141 bits (355), Expect = 2e-38
 Identities = 79/289 (27%), Positives = 150/289 (51%), Gaps = 8/289 (2%)

Query: 11  LDDLNLFRLVVENGSYTSTSKKTMIPVATITRRIQALEDSLNLRLLNRHARKLTLTEAGE 70
           L+ + LF  VV +  ++  ++   +P +TI+R++  LE+ L +RLL R +R L+LT+ G 
Sbjct: 4   LNGMALFAAVVRSQGFSQAARDIGMPKSTISRKVAQLEEELGVRLLQRDSRNLSLTQVGT 63

Query: 71  RFYKDCSPLLERLASMTEEITDECRGASGRIRISAPSNLTKRMMMPMFNAFMEKYPDIHI 130
            FY+ C  ++  L +    I       SG +RI+ P + ++ ++  + + F+  YP + +
Sbjct: 64  LFYQHCETIVNELEAAKAVIEHTHADVSGSLRIAIPVSFSQELIANLCSGFLRLYPSVEL 123

Query: 131 ELMMSNQADDLDPTEWDVIFRVGPQRDSSLIARKIGEVKDILVASPQYLSSHPQPTHAEE 190
           ++  ++    L    +D+  + GP + S  +AR + E + ILVASP YL  H  P   +E
Sbjct: 124 DVQFTDSDVGLVGEGYDIAIKYGPLQPSDNVARLLFERQPILVASPGYLKKHGTPATPKE 183

Query: 191 LHQHQ-----LLKGYPLLKWQLTNSQGETVVNSDRGRFQASALNVVRSACSEGLGITLMP 245
           L QH        +  P+  W L     +T+V+ +R + + ++  +VR    +  GI ++ 
Sbjct: 184 LGQHAGILLGTTRSAPI--WPLGKGGRKTMVSFNR-KVRVNSAVMVRQLALDDFGIAMLS 240

Query: 246 DVMLREFLEDGSLVQVLSDWSSNPRDIYMLYNHKDHQPEKVRLFIDFVI 294
               ++ L  GSL+ +L +W   P  +Y +Y+ +      + +F+DF I
Sbjct: 241 HAQCKKDLASGSLLPILPEWPMEPFKVYGVYSSRKQLATNISVFLDFFI 289