Pairwise Alignments

Query, 299 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 290 a.a., LysR, substrate-binding (RefSeq) from Shewanella amazonensis SB2B

 Score =  145 bits (365), Expect = 1e-39
 Identities = 87/279 (31%), Positives = 149/279 (53%), Gaps = 4/279 (1%)

Query: 9   MKLDDLNLFRLVVENGSYTSTSKKTMIPVATITRRIQALEDSLNLRLLNRHARKLTLTEA 68
           M+ + +  F  V E  S+T+ + +  I  A ++R+++ LE+ L  +LL R  RK++LTE 
Sbjct: 1   MRWEGICEFVAVAEAQSFTAAAGRLGISTAQVSRQVRELEERLGSKLLYRTTRKVSLTED 60

Query: 69  GERFYKDCSPLLERLASMTEEITDECRGASGRIRISAPSNLTKRMMMPMFNAFMEKYPDI 128
           G+ FY+ C  +L+ L      ++       G IR++AP    ++ +MP+  A+M+++P +
Sbjct: 61  GQLFYRHCRQVLDGLDEAERAVSSLKSEPRGLIRMTAPVTYGEQYVMPIVLAYMQQFPQV 120

Query: 129 HIELMMSNQADDLDPTEWDVIFRVGPQRDSSLIARKIGEVKDILVASPQYLSSHPQPTHA 188
            ++  ++NQ  DL    +D+  R+G   DSS++ARK+ E    LVASP Y+S H  P   
Sbjct: 121 EVQCELTNQQLDLVQGGFDLAIRLGVLPDSSMMARKLAERVQYLVASPDYVSRHGAPHSL 180

Query: 189 EELHQHQLLKG-YPLLKWQLTNSQGETVVNSDRGRFQASALNVVRSACSEGLGITLMPDV 247
            EL +HQ L G  P  ++Q    +G+      +GR   S+ N + +A   G+GI  +P  
Sbjct: 181 SELSRHQCLLGSLPFWRFQ---EEGKLRSLKVKGRLSCSSGNTLLAAALAGMGIAQLPGY 237

Query: 248 MLREFLEDGSLVQVLSDWSSNPRDIYMLYNHKDHQPEKV 286
            + E + DG L+ +L  +      I+ LY H      K+
Sbjct: 238 YVDEAIRDGRLLVLLKPFQEPKEGIWGLYPHNRQLSPKI 276