Pairwise Alignments

Query, 299 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 303 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  143 bits (361), Expect = 4e-39
 Identities = 78/287 (27%), Positives = 155/287 (54%), Gaps = 8/287 (2%)

Query: 11  LDDLNLFRLVVENGSYTSTSKKTMIPVATITRRIQALEDSLNLRLLNRHARKLTLTEAGE 70
           L+ + LF  VV    ++  ++ T +P +TI+R++  LE+ L +RLL R  R L+LT+ G 
Sbjct: 4   LNGMMLFAAVVRAKGFSQAARNTGMPKSTISRKVAQLEEQLGVRLLQRDTRNLSLTQVGA 63

Query: 71  RFYKDCSPLLERLASMTEEITDECRGASGRIRISAPSNLTKRMMMPMFNAFMEKYPDIHI 130
            FY+ CS + + + +    I +      G +RI+ P + ++ ++  + ++FM  YP++ +
Sbjct: 64  LFYQHCSSISDEIEAAKATIENTHNDVFGSLRIAIPVSFSQELIASLCSSFMRLYPNVDL 123

Query: 131 ELMMSNQADDLDPTEWDVIFRVGPQRDSSLIARKIGEVKDILVASPQYLSSHPQPTHAEE 190
           ++  ++    L    +D+  + GP + S L+AR + E + ILVASP YL ++  P   ++
Sbjct: 124 DVQFTDSDVGLVGEGYDIAIKYGPLQSSDLVARLLFERQPILVASPGYLKANGTPATPQD 183

Query: 191 LHQHQLL-----KGYPLLKWQLTNSQGETVVNSDRGRFQASALNVVRSACSEGLGITLMP 245
           L +H  +     +  P+  W L   + +T+VN  R + + ++  +V+    +  GI ++ 
Sbjct: 184 LKEHSGILLGTSRSAPI--WPLGKGERKTMVNFKR-KVRVNSAIMVKQLVLDDFGIAMLS 240

Query: 246 DVMLREFLEDGSLVQVLSDWSSNPRDIYMLYNHKDHQPEKVRLFIDF 292
           + + +  L  GSLV +L +W   P  +Y +Y+ +      + +F+DF
Sbjct: 241 NSVCKNELAGGSLVPLLQEWPMEPFKVYGVYSSRRQLATNISVFLDF 287