Pairwise Alignments

Query, 299 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 297 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  159 bits (401), Expect = 1e-43
 Identities = 92/285 (32%), Positives = 155/285 (54%), Gaps = 5/285 (1%)

Query: 10  KLDDLNLFRLVVENGSYTSTSKKTMIPVATITRRIQALEDSLNLRLLNRHARKLTLTEAG 69
           +L+ ++LF  +V  G ++  +K+  +PVAT++R++  LE  L+ +L+ R  RKL LTE G
Sbjct: 8   ELELIHLFVHLVNTGGFSQVAKELGMPVATVSRKVTKLESLLDTQLIMRSTRKLRLTEEG 67

Query: 70  ERFYKDCSPLLERLASMTEEITDECRGASGRIRISAPSNLTKRMMMPMFNAFMEKYPDIH 129
              +     ++ +    +E   ++   A G +RI+AP ++   + + + N F + YPDI 
Sbjct: 68  SELFGRYQNVVAQFDRCSEPRVEK---AEGTLRIAAPVSIISMIFIGVLNDFSKAYPDIQ 124

Query: 130 IELMMSNQADDLDPTEWDVIFRVGPQRDSSLIARKIGEVKDILVASPQYLSSHPQPTHAE 189
           + +  +N + DL     DV    G Q DSS +++ +G +   L ASP YL+    P H +
Sbjct: 125 LHITQNNSSIDLIDEGVDVAIVGGAQPDSSWVSKSLGVLDYGLFASPGYLACAGTPQHPD 184

Query: 190 ELHQHQLLKGYPLLKWQLTNSQGETVVNSDRGRFQASALN-VVRSACSEGLGITLMPDVM 248
           +L +H L+K +PL  W + +  GE        +     LN  VR+   +G GI   P++ 
Sbjct: 185 QLVEHSLIKVWPLFNWSMKHVSGEDFYYEGPAKLTLGDLNGAVRATVDDG-GILYGPELF 243

Query: 249 LREFLEDGSLVQVLSDWSSNPRDIYMLYNHKDHQPEKVRLFIDFV 293
           ++  L  G L +VL DW    R I +LY+ + HQP KV+LFI+F+
Sbjct: 244 VKGELASGELRRVLPDWHGEQRRISLLYHQRTHQPLKVKLFIEFM 288