Pairwise Alignments

Query, 299 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  154 bits (388), Expect = 3e-42
 Identities = 88/286 (30%), Positives = 153/286 (53%), Gaps = 8/286 (2%)

Query: 13  DLNLFRLVVENGSYTSTSKKTMIPVATITRRIQALEDSLNLRLLNRHARKLTLTEAGERF 72
           ++ LF  VVE GS++  +++  I  + +++RI ALE +L ++L+ R  R+L LT+AG ++
Sbjct: 6   NIPLFVSVVELGSFSEAARRLGINKSAVSKRISALEQALGVKLIQRTTRRLHLTDAGRQY 65

Query: 73  YKDCSPLLERLASMTEEITDECRGASGRIRISAPSNLTKRMMMPMFNAFMEKYPDIHIEL 132
           Y+        +    + +  +     G +++S P+   +R + P+ + F  +YP I++E+
Sbjct: 66  YEYVHQAAALMQQAQDALASQQGAVQGSLKVSLPNVFGQRHIAPLLSEFSRQYPTINLEV 125

Query: 133 MMSNQADDLDPTEWDVIFRVGPQRDSSLIARKIGEVKDILVASPQYLSSHPQPTHAEELH 192
            + ++  DL     D++ R+G   DSSL+A K+     +L ASP YL+    P    +L 
Sbjct: 126 SLDDRVVDLLKEGLDMVVRIGDLPDSSLVAVKLAPCHSLLCASPDYLAHQSHPRSLADLR 185

Query: 193 QHQLL-----KGYPLLKWQLTNSQGETVVNSDRGRFQASALNVVRSACSEGLGITLMPDV 247
            H  L     +G   L+W     +GE      RG  + +   V+R    +G+GI LMP  
Sbjct: 186 GHNCLFYSYFRGG--LEWSF-ERRGEVSRIKPRGNIKVNNSEVIRRLLLDGMGIALMPRY 242

Query: 248 MLREFLEDGSLVQVLSDWSSNPRDIYMLYNHKDHQPEKVRLFIDFV 293
           ++ E L  G+LV VLSD+ +    IY L   + H P ++R+FIDF+
Sbjct: 243 LVEEELAAGTLVPVLSDYQAPTHGIYALTPERQHMPARLRVFIDFL 288