Pairwise Alignments

Query, 299 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 289 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  150 bits (379), Expect = 3e-41
 Identities = 84/277 (30%), Positives = 148/277 (53%), Gaps = 2/277 (0%)

Query: 17  FRLVVENGSYTSTSKKTMIPVATITRRIQALEDSLNLRLLNRHARKLTLTEAGERFYKDC 76
           F  V E  S+T  +K+  I  A ++R++ ALE  +  +L +R  RK++++E G  +Y+ C
Sbjct: 10  FVAVAEAESFTKAAKQLGISTAQVSRQVSALETRMATKLFHRTTRKVSVSEVGRIYYQHC 69

Query: 77  SPLLERLASMTEEITDECRGASGRIRISAPSNLTKRMMMPMFNAFMEKYPDIHIELMMSN 136
             +L+ L      IT+      G ++I+AP    ++ ++P+ N F+ KYP++ +++ ++N
Sbjct: 70  RQVLDGLEEAERAITNLQSTPRGLLKITAPVTYGEKTLVPLVNDFIAKYPELEVKINLTN 129

Query: 137 QADDLDPTEWDVIFRVGPQRDSSLIARKIGEVKDILVASPQYLSSHPQPTHAEELHQHQL 196
           Q  DL    +D+  R+G  +DSS++A+++G     + ASP Y+S+   P    EL QH  
Sbjct: 130 QKVDLIDDGYDLAIRLGQLKDSSIMAKRLGSRTQYVCASPDYVSTFGIPHSLSELEQHNC 189

Query: 197 LKGYPLLKWQLTNSQGETVVNSDRGRFQASALNVVRSACSEGLGITLMPDVMLREFLEDG 256
           L G   L +      G+T     +G    ++   +  A  +G+GI  +P+  +  FLEDG
Sbjct: 190 LLG--TLDYWRFQENGKTRNVRVKGNLTCNSGYALVDAAIKGIGIIQLPEYYVLPFLEDG 247

Query: 257 SLVQVLSDWSSNPRDIYMLYNHKDHQPEKVRLFIDFV 293
            LV +L         I+ LY H  H   KVR+ +D++
Sbjct: 248 QLVPLLEQNRQPKEGIWALYPHNRHLSPKVRMLLDYL 284