Pairwise Alignments

Query, 299 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 295 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  155 bits (391), Expect = 1e-42
 Identities = 91/284 (32%), Positives = 153/284 (53%), Gaps = 4/284 (1%)

Query: 14  LNLFRLVVENGSYTSTSKKTMIPVATITRRIQALEDSLNLRLLNRHARKLTLTEAGERFY 73
           L +F  VVE GS++   +K  +  + I++RI  LE  L ++LL R  R L+LT+AG R++
Sbjct: 7   LPIFVTVVECGSFSLAGQKLGLSKSAISKRISQLEQHLGIQLLQRTTRSLSLTDAGARYF 66

Query: 74  KDCSPLLERLASMTEEITDECRGASGRIRISAPSNLTKRMMMPMFNAFMEKYPDIHIELM 133
           +   P ++      + I++  +   G +RIS P    +  + P+   F+++YPDI +++ 
Sbjct: 67  EYIRPAVQLTQEGLDAISELQQTPRGNLRISVPMVFGRLYIAPLIAEFLKRYPDIQLQMQ 126

Query: 134 MSNQADDLDPTEWDVIFRVGPQRDSSLIARKIGEVKDILVASPQYLSSHPQPTHAEELHQ 193
           M ++  DL    +D+  R+G   DSSLIARKI     ++ ASP YL+ H  P    EL Q
Sbjct: 127 MDDKITDLIAGGFDLAIRIGELPDSSLIARKIAPCLSVICASPAYLTQHGLPMTPCELTQ 186

Query: 194 HQ-LLKGY--PLLKWQLTNSQGETVVNSDRGRFQASALNVVRSACSEGLGITLMPDVMLR 250
           H  L   Y    ++W   +  G   V   +G +Q +  + +  AC +GLGI  +P  ++ 
Sbjct: 187 HNCLFYSYFQDGVEWSFHSPDGMQRV-QPKGNYQVNNSDAINQACLDGLGIANLPRFIVE 245

Query: 251 EFLEDGSLVQVLSDWSSNPRDIYMLYNHKDHQPEKVRLFIDFVI 294
             L+ G L  +L+D+      IY +Y  + +QP KV + I+F++
Sbjct: 246 PDLQTGHLQALLTDYPLPEHGIYAVYPQRKYQPTKVTVLIEFLM 289