Pairwise Alignments

Query, 299 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 295 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score =  168 bits (425), Expect = 2e-46
 Identities = 101/287 (35%), Positives = 160/287 (55%), Gaps = 7/287 (2%)

Query: 11  LDDLNLFRLVVENGSYTSTSKKTMIPVATITRRIQALEDSLNLRLLNRHARKLTLTEAGE 70
           LDDL  F  V  +GS+   ++   +P++T++RRI+ LE  L LRLLNR A ++ LT  GE
Sbjct: 7   LDDLRCFCAVARSGSFKEAAQSLGMPLSTLSRRIRQLETDLQLRLLNRDAHRVILTSIGE 66

Query: 71  RFYKDCSPLLERLASMTEEITDECRGASGRIRISAPSNLTKRMMMPMFNAFMEKYPDIHI 130
           ++++    L + L ++ E++  +     G+IRISAP N     +  +F  F+ +YPDI +
Sbjct: 67  QYFERSVALFDELNNIDEDLHRDKYQPQGKIRISAPINSGTHFLRSIFYDFLLQYPDIQL 126

Query: 131 ELMMSNQADDLDPTEWDVIFRVGPQRDSSLIARKIGEVKDILVASPQY-LSSHPQPTHAE 189
           +L  SN   D++    DV FRVG     + IAR +  +  IL + P Y +SS   P   +
Sbjct: 127 DLSFSNSLIDIEAEGMDVAFRVGNPVVENWIARPLKHIHFILCSHPDYDISSITTP---D 183

Query: 190 ELHQHQLLKGYPLLKWQLTN-SQGETV-VNSDRG-RFQASALNVVRSACSEGLGITLMPD 246
           +L  H  +  +P++ WQL + + GE    + ++G R +   L ++  A   G+GI  +PD
Sbjct: 184 KLCGHPTIICHPMIPWQLVHKTTGEEFDYHPNKGVRLEVDELMLLTHAIKTGIGIGYVPD 243

Query: 247 VMLREFLEDGSLVQVLSDWSSNPRDIYMLYNHKDHQPEKVRLFIDFV 293
                 +  G +  VL +WSS  R + MLY  +DH P +VRLFI+FV
Sbjct: 244 YFALPMIAQGEVNHVLPEWSSKARTLSMLYRDRDHLPMRVRLFIEFV 290