Pairwise Alignments

Query, 299 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 317 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score =  143 bits (361), Expect = 4e-39
 Identities = 85/288 (29%), Positives = 149/288 (51%), Gaps = 4/288 (1%)

Query: 9   MKLDDLNLFRLVVENGSYTSTSKKTMIPVATITRRIQALEDSLNLRLLNRHARKLTLTEA 68
           M L+ + +F  VVE GS+T  +K   +  AT++R+I  LE     +LL R  R L LTEA
Sbjct: 1   MDLNRVQIFAQVVEQGSFTGAAKALGLTKATVSRKIAELESDTGTQLLFRTTRALKLTEA 60

Query: 69  GERFYKDCSPLLERLASMTEEITDECRGASGRIRISAPSNLTKRMMMPMFNAFMEKYPDI 128
           G  +Y   + +L  L S   +++   +   G ++I  P  L +  + P+F  F+  YPDI
Sbjct: 61  GSSYYNRINKILSDLQSAENQLSAHQQLIKGNLKIVCPIELGQLFLGPIFAQFLTLYPDI 120

Query: 129 HIELMMSNQADDLDPTEWDVIFRVGPQRDSSLIARKIGEVKDILVASPQYLSSHPQPTHA 188
            IE  ++N+  D+     D++F++    D+ L +  +      L+ASP YL+ H  P   
Sbjct: 121 TIEAELTNRKVDVIEEGIDLLFQIADSSDTRLQSYSLVNAYKSLMASPSYLAEHGTPKVP 180

Query: 189 EELHQHQLLK---GYPLLKWQLTNSQGETVVNSDRGRFQASALNVVRSACSEGLGITLMP 245
           ++L +H+ ++    +    W+L + Q   V+     +   + + + R A   GLGIT +P
Sbjct: 181 QDLAKHKAIRLQSAHIEGAWKLFDGQSWVVIEPVT-QLTVNNVTIAREAAIAGLGITAVP 239

Query: 246 DVMLREFLEDGSLVQVLSDWSSNPRDIYMLYNHKDHQPEKVRLFIDFV 293
            ++ +E +E G LV +L D+      + + Y  + + P K R+FI+F+
Sbjct: 240 SIIAQEAIEKGYLVPLLDDYPMVQTKVVLSYPKRAYLPRKYRVFIEFI 287