Pairwise Alignments

Query, 708 a.a., fatty acid oxidation complex subunit alpha FadJ from Vibrio cholerae E7946 ATCC 55056

Subject, 703 a.a., Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) from Pseudomonas fluorescens FW300-N2E2

 Score =  328 bits (840), Expect = 7e-94
 Identities = 216/648 (33%), Positives = 339/648 (52%), Gaps = 30/648 (4%)

Query: 65  NFIAGADVRMLEACQSVHEAQALASQGQQMFQQLADLPFPVVAAIHGPCLGGGLELALAC 124
           NFIAGAD+R     +++  + + A+        L     P VAAIHG  LGGGLE ALAC
Sbjct: 60  NFIAGADIRQFGKARTITTSMSAAA--------LDASAKPTVAAIHGYALGGGLEHALAC 111

Query: 125 DYRVCTEDEVTRLGLPEVMLGLLPGSGGTQRLPRLIGLLPALDLILTGKQLRAKKAKKLG 184
            YR+       +LGLPEV LGL+PG GGTQRLPRL+G   A DL+++ + + A +A ++G
Sbjct: 112 HYRIALP--TAKLGLPEVALGLIPGGGGTQRLPRLVGAAVATDLLVSSRHIHAPEALQIG 169

Query: 185 VVDACVP---HSVLLDVAKRLLEEKGHKKRAQVTLPIKEKLLANTDLGRKLIFDQAAKKT 241
           ++   VP   +  L D A R  +   H +  +V     E + A T     +   QAA++ 
Sbjct: 170 LISQIVPGTQNQELRDAAVRYAKAVAHAQPQRVRDLALEPMDATT-----MDLLQAARRE 224

Query: 242 QQKTRGNYPAAQAILEVIQYGLEKGMHAGLEYEAKRFAELVMTRESKALRSIFFATTEMK 301
             K   +  A Q  ++ I+          LE E++ F+EL  +  +KALR  FFA  E  
Sbjct: 225 AAKKSPHNKAPQYAIDCIEAAFNLPFDEALEVESRLFSELEGSDVAKALRYAFFAEREAA 284

Query: 302 K--DLGADAKPAPVAAVGVLGGGLMGAGISHVTVAKAKTSVRIKDVANDGVLNALNYNYK 359
           K  D     KPA V +  V+G G MGAGI+ +  A A   V++ + + + +   L     
Sbjct: 285 KVPDAPPGFKPAGVTSAAVIGAGTMGAGIA-ICFADAGIVVKLLEASAEALDRGLQRIRD 343

Query: 360 LFDKQRQRKILTKAQLQAQMSQLSGGTGFVGFDRCDVVIEAVFEDLKLKQQMVADIEANA 419
           ++  + +R  +T  ++ A +  +   + +     CDVV+EAVFE + LK+ +   ++A  
Sbjct: 344 IYAVKVKRGRMTVQEMDACLQFVQPVSHYEEIGDCDVVVEAVFERIDLKKDVFTKLDAVM 403

Query: 420 KPTTIFATNTSSLPIHQIASQAQRPQNIVGLHYFSPVEKMPLVEVIPHATTSDETIATVV 479
           KP  +  TN+S++ I+ +A+   RPQ++ G H+F+P   M L E++    TS ET+   +
Sbjct: 404 KPGALLLTNSSAIDINVMANMTGRPQSVAGAHFFAPANAMKLCEIVKGDQTSIETVVRAM 463

Query: 480 TLARKQGKTPIVVKDCAGFYVNRILAPYMNEAAQVLMAGEPIEKLDAALLDFGFPVGPIT 539
            + R   K   V   C GF  NR  AP + E   +L  G   E++D  +++FG+P+GP  
Sbjct: 464 KMGRDLKKVCAVSGTCDGFAANRSRAPLVTEMMLLLEEGARPEQIDRVMVEFGYPMGPFA 523

Query: 540 LLDEVGVDIGAKIMPILVKELGPRFQGPDVFDVLLKDNRKGRKSGKGFYTY-KGSKKKEV 598
           + D  G+D+             P+++   V D +++  RKG+K+G G+Y Y +G +    
Sbjct: 524 VSDLSGLDVSYDTRKRRA-AADPQYRKLHVPDRMVELGRKGQKNGAGWYRYEEGDRTPRH 582

Query: 599 DKSVYKLLKL------TPESKLNDKEIAMRCLLPMLNEAVRCLDEGIIRSARDGDMGAIF 652
           D+ V +++        TP+    D EI  R L   +NEA + LDEG    A D D+  ++
Sbjct: 583 DEEVMRIIATVAHELGTPQRTFTDSEILKRLLFASINEACKILDEGKAYRASDIDVMWLY 642

Query: 653 GIGFPPFLGGPFRYMDTLGLTKVVEMMNQHTEKYGERFAPCDGLLTRA 700
           G GFP   GG   + DT+G T++   + Q  E+YG R+AP   LL++A
Sbjct: 643 GFGFPRHRGGLLYWADTIGATEIHLQVQQWHEQYGRRWAP-SPLLSKA 689