Pairwise Alignments

Query, 708 a.a., fatty acid oxidation complex subunit alpha FadJ from Vibrio cholerae E7946 ATCC 55056

Subject, 701 a.a., 3-hydroxyacyl-CoA dehydrogenase from Pseudomonas stutzeri RCH2

 Score =  326 bits (835), Expect = 3e-93
 Identities = 222/698 (31%), Positives = 366/698 (52%), Gaps = 31/698 (4%)

Query: 21  IDVPGEKMNTLQAAFAEEMQAVFATLNEKRGQIKGLIIHSLKPDNFIAGADVRMLEACQS 80
           I V    +N L  A  E +Q  F +  E   Q++ + +   + + FIAGAD++       
Sbjct: 16  ITVNNPPVNALGQAVREGLQKAFQSA-EADPQVRAVAL-VCEGNTFIAGADIKEFG---K 70

Query: 81  VHEAQALASQGQQMFQQLADLPFPVVAAIHGPCLGGGLELALACDYRVCTEDEVTRLGLP 140
             +A +L     ++ + +       VA IHG  LGGGLE+AL C YR+  +D   ++GLP
Sbjct: 71  PPQAPSLP----EVIEIIEACNKSSVAVIHGTALGGGLEVALGCHYRIARKD--AKVGLP 124

Query: 141 EVMLGLLPGSGGTQRLPRLIGLLPALDLILTGKQLRAKKAKKLGVVDACVPHSVL---LD 197
           EV LGLLPG+GGTQRLPRL G+  AL++I++G+ + A +A +  +VD      ++   L 
Sbjct: 125 EVKLGLLPGAGGTQRLPRLAGVEKALEMIVSGQPISAAEAVEHNIVDELFEGDLVEAGLA 184

Query: 198 VAKRLLEEKGHKKRAQVTLPIKEKLLANTDLGRKLIFDQAAKKTQQKTRGNYPAAQAILE 257
             +R++EE    +R        E+         + +      +  ++  G +   + I  
Sbjct: 185 YVRRMVEEGRTPRRTG------EQTQGLEGADNEALIRAKHAEVAKRMPGLFSPLRCIAA 238

Query: 258 VIQYGLEKGMHAGLEYEAKRFAELVMTRESKALRSIFFATTEMKK--DLGADAKPAPVAA 315
           V +   +  +  GL+ E + FAE + + +  AL   FFA  +  K  DL +D KP  + +
Sbjct: 239 V-EAATKLPLAEGLKRERELFAECLNSPQRGALVHSFFAERQAGKINDLPSDTKPRSINS 297

Query: 316 VGVLGGGLMGAGISHVTVAKAKTSVRIKDVANDGVLNALNYNYKLFDKQRQRKILTKAQL 375
             V+GGG MG GI+ ++ A A   V++ ++  + +   L      +    +R  LT+  +
Sbjct: 298 AAVIGGGTMGVGIA-LSFANAGVPVKLLEINEEALQRGLQRARDTYAASVKRGSLTEDAM 356

Query: 376 QAQMSQLSGGTGFVGFDRCDVVIEAVFEDLKLKQQMVADIEANAKPTTIFATNTSSLPIH 435
           + +++ + G T +      DVV+EAVFE++ +KQQ+   ++A  KP  I A+NTSSL + 
Sbjct: 357 EQRLALIEGVTEYAALADADVVVEAVFEEMGVKQQVFEQLDAICKPGAILASNTSSLDLD 416

Query: 436 QIASQAQRPQNIVGLHYFSPVEKMPLVEVIPHATTSDETIATVVTLARKQGKTPIVVKDC 495
            IA+  +RP+++VGLH+FSP   M L+EV+  A TSDE +AT + + ++  K  +VV  C
Sbjct: 417 AIAAFTKRPEDVVGLHFFSPANVMRLLEVVRGAKTSDEVLATAMAIGKQLKKVSVVVGVC 476

Query: 496 AGFYVNRILAPYMNEAAQVLMAGEPIEKLDAALLDFGFPVGPITLLDEVGVDIGAKIMPI 555
            GF  NR++  Y  EA  +L  G   +++DAAL +FG  +GP  + D  G+DIG  I   
Sbjct: 477 DGFVGNRMVFQYGREAEFLLEEGATPQQVDAALRNFGMAMGPFAMRDLSGLDIGQAIRKR 536

Query: 556 LVKELGPRFQGPDVFDVLLKDNRKGRKSGKGFYTYK-GSKKKEVDKSVYKLLKLTPESK- 613
               L      P V D L      G+K+G G+Y Y+ G++  + +  +  +L+     K 
Sbjct: 537 QRATLPAHLDFPTVSDKLCAAGMLGQKTGAGYYRYEPGNRTPQENPDLAPMLEAASLEKG 596

Query: 614 -----LNDKEIAMRCLLPMLNEAVRCLDEGIIRSARDGDMGAIFGIGFPPFLGGPFRYMD 668
                L+++ I  RC+  ++NE  + L+EGI + + D D+  + G GFP F GGP  Y D
Sbjct: 597 IERKALDEQYIVERCIFALVNEGAKILEEGIAQRSSDIDVIYLNGYGFPAFRGGPMFYAD 656

Query: 669 TLGLTKVVEMMNQHTEKYGERFAPCDGLLTRAGLGEKF 706
           ++GL +V+  + +   + G+ + P   L   A  G  F
Sbjct: 657 SVGLDRVLARVKELHARCGDWWKPAPLLEKLAAEGRTF 694