Pairwise Alignments

Query, 708 a.a., fatty acid oxidation complex subunit alpha FadJ from Vibrio cholerae E7946 ATCC 55056

Subject, 412 a.a., 3-hydroxyacyl-CoA dehydrogenase from Pseudomonas stutzeri RCH2

 Score =  215 bits (548), Expect = 3e-60
 Identities = 132/401 (32%), Positives = 218/401 (54%), Gaps = 10/401 (2%)

Query: 313 VAAVGVLGGGLMGAGISHVTVAKAKTSVRIKDVANDGVLNALNYNYKLFDKQRQRKILTK 372
           +    V+G G MG GI  +++A A   VR  D   + +  AL      +    ++  + +
Sbjct: 8   IQTAAVIGAGTMGRGIV-MSLANAGVQVRWLDNNPEMLERALGTVADTYAHNVRQGRIDE 66

Query: 373 AQLQAQMSQLSGGTGFVGFDRCDVVIEAVFEDLKLKQQMVADIEANAKPTTIFATNTSSL 432
           AQ  A+ + +S    +      D+VIEAV+E+L+LKQ++  +++   KP  I A+NTS+L
Sbjct: 67  AQAAARRACISKAADYQALADVDLVIEAVYENLELKQKIFRELDGIVKPAGILASNTSAL 126

Query: 433 PIHQIASQAQRPQNIVGLHYFSPVEKMPLVEVIPHATTSDETIATVVTLARKQGKTPIVV 492
            +  IA+  +RP+ +VGLH+FSP   M L+E++  A TS   +     L ++ GK  ++ 
Sbjct: 127 DLDAIAAVTKRPEQVVGLHFFSPAHIMKLLEIVRGAKTSKAVLDASTELGKRMGKVSVIA 186

Query: 493 KDCAGFYVNRILAPYMNEAAQVLMAGEPIEKLDAALLDFGFPVGPITLLDEVGVDIGAKI 552
            +C GF  NR+LA Y+ EA  +L+ G    ++DAAL  FGF +GP  + D VG+D+  + 
Sbjct: 187 GNCQGFIGNRMLATYVREARMMLLEGAYPHQVDAALQGFGFAMGPFRMYDVVGIDLEWRA 246

Query: 553 MPILVKELGPRFQGPDVFDVLLKDNRKGRKSGKGFYTY-KGSKKKEVDKSVYKLLKLTPE 611
             +  K  G       V + L +  R G+KS  G+Y Y +GS++ E D  V  L++   E
Sbjct: 247 RELAGK--GQDEVEVQVDNRLCELGRFGQKSRMGYYRYAEGSRQAEHDPEVDALVQRESE 304

Query: 612 ------SKLNDKEIAMRCLLPMLNEAVRCLDEGIIRSARDGDMGAIFGIGFPPFLGGPFR 665
                  ++  +EI  RCLL ++NE  + L+EG+  S+ D D   ++G GFP  +GGP  
Sbjct: 305 RLGFQRREIGSEEILERCLLALVNEGAKILEEGMAESSADIDTVYLYGYGFPAEVGGPMT 364

Query: 666 YMDTLGLTKVVEMMNQHTEKYGERFAPCDGLLTRAGLGEKF 706
           + D  GL  + + +N   E++G  + P + + + A LG +F
Sbjct: 365 WADRQGLPAIRDRLNALAERHGAHWQPAELIDSLATLGGRF 405