Pairwise Alignments

Query, 708 a.a., fatty acid oxidation complex subunit alpha FadJ from Vibrio cholerae E7946 ATCC 55056

Subject, 508 a.a., 3-hydroxyacyl-CoA dehydrogenase from Pseudomonas stutzeri RCH2

 Score =  160 bits (404), Expect = 2e-43
 Identities = 101/334 (30%), Positives = 172/334 (51%), Gaps = 6/334 (1%)

Query: 316 VGVLGGGLMGAGISHVTVAKAKTSVRIKDVANDGVLNALNYNYKLFDKQRQRKILTKAQL 375
           +GV+G G MG GI+ +     K  V + D  ++ + +AL +N +L ++   +  L+ A+L
Sbjct: 5   IGVVGAGAMGRGIAQLFAGAGK-QVWLHDSRSESISDALRFNRELLERGVAKGRLSVAEL 63

Query: 376 QAQMSQLSGGTGFVGFDRCDVVIEAVFEDLKLKQQMVADIEANAKPTTIFATNTSSLPIH 435
            A ++++           CD+VIEA+ E+L++KQ +  ++EA      + ATNTSSL + 
Sbjct: 64  DATLARMQAAPALADLSGCDLVIEAIVENLEIKQALFVELEALLAEDAVLATNTSSLSVT 123

Query: 436 QIASQAQRPQNIVGLHYFSPVEKMPLVEVIPHATTSDETIATVVTLARKQGKTPIVVKDC 495
           +IA+  + P  + G H+F+PV  M LVEV+    +  + I  +V LA   G  P +  D 
Sbjct: 124 RIAAACRLPGRVAGFHFFNPVPLMKLVEVVRGERSDPQVIQRLVKLAEDAGHFPAITPDT 183

Query: 496 AGFYVNRILAPYMNEAAQVLMAG-EPIEKLDAALLDF-GFPVGPITLLDEVGVDIGAKIM 553
            GF VN     Y  EA ++L  G    E++D  L D  GF +GP  L D  G+DI   +M
Sbjct: 184 PGFLVNHAGRAYSTEAQRILAEGIADAEQIDRILRDGPGFRMGPFELFDLTGLDISHAVM 243

Query: 554 PILVKEL--GPRFQGPDVFDVLLKDNRKGRKSGKGFYTYKGSKKKEVDKSVYKLLKLTPE 611
             + ++    PR+         +     GRK+G+G+Y Y+  ++    +  +  +++   
Sbjct: 244 ESVYQQFYQDPRYTPSYQAAQRVAAGLLGRKTGQGYYRYENGQQIRTPEPQFSPVRIERP 303

Query: 612 SKLNDKEIAMRCLLPMLNEAVRC-LDEGIIRSAR 644
             L+ ++ A+R  L  L +A    L+ G + SAR
Sbjct: 304 FWLDSQDPALRSQLAALLQAAGAQLESGEVPSAR 337