Pairwise Alignments

Query, 708 a.a., fatty acid oxidation complex subunit alpha FadJ from Vibrio cholerae E7946 ATCC 55056

Subject, 721 a.a., 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase from Pseudomonas syringae pv. syringae B728a

 Score =  416 bits (1070), Expect = e-120
 Identities = 262/706 (37%), Positives = 391/706 (55%), Gaps = 28/706 (3%)

Query: 19  LAIDVPGEKMNTLQAAFAEEM-QAVFATLNEKRGQIKGLIIHSLKPDNFIAGADVRMLEA 77
           L  D+ GE +N        E  QAV A   +    +KG+I+ S K D+FI GAD+     
Sbjct: 20  LNFDLKGESVNKFNRLTLNEFRQAVDAVKAD--ASVKGVIVTSGK-DSFIVGADITEFVD 76

Query: 78  CQSVHEAQALAS--QGQQMFQQLADLPFPVVAAIHGPCLGGGLELALACDYRVCTEDEVT 135
              + EA+ +A   +  ++F    DL  P V AI+G  LGGGLE+ LA DYRV       
Sbjct: 77  NFKLPEAELVAGNLEANRIFSDFEDLNVPTVVAINGIALGGGLEMCLAADYRVMASS--A 134

Query: 136 RLGLPEVMLGLLPGSGGTQRLPRLIGLLPALDLILTGKQLRAKKAKKLGVVDACVPHSVL 195
           R+GLPEV LGL PG GGT RLPR+IG   A++ I +GK+  A+ A K+G VDA V    L
Sbjct: 135 RIGLPEVKLGLYPGFGGTVRLPRIIGADNAIEWIASGKENAAEDALKVGAVDAVVAPEKL 194

Query: 196 ----LDVAKRLLE-EKGHKKRAQVTLPIKEKLLANTDLGRKLIFDQAAKKTQQKTRGNYP 250
               LD+ +R +  E  +K + Q   P  +KL  N  + + + F+ A      +   NYP
Sbjct: 195 QAAALDLIQRAISGEFDYKAKRQ---PKLDKLKLNA-IEQMMAFETAKGFVAGQAGPNYP 250

Query: 251 AAQAILEVIQYGLEKGMHAGLEYEAKRFAELVMTRESKALRSIFFATTEMKKDL-GADAK 309
           A    ++ IQ     G    LE EA  F ++  T  +++L  +F    E+KK   G D  
Sbjct: 251 APVEAIKTIQKAANFGRDKALEIEAAGFVKMAKTPAAQSLIGLFLNDQELKKKARGYDKI 310

Query: 310 PAPVAAVGVLGGGLMGAGISHVTVAKAKTSVRIKDVANDGVLNALNYNYKLFDKQRQRKI 369
              V    VLG G+MG GI++ +  K  T + +KD+  + +   LN   KL   + ++  
Sbjct: 311 AKDVKQAAVLGAGIMGGGIAYQSAVKG-TPILMKDIREEAIQLGLNEASKLLGGRLEKGR 369

Query: 370 LTKAQLQAQMSQLSGGTGFVGFDRCDVVIEAVFEDLKLKQQMVADIEANAKPTTIFATNT 429
           LT A++   ++ +     +  F   D+V+EAV E+ K+KQ ++A++EAN    TI A+NT
Sbjct: 370 LTAAKMAEALNAIRPTLSYGDFGNVDLVVEAVVENPKVKQAVLAEVEANVGENTILASNT 429

Query: 430 SSLPIHQIASQAQRPQNIVGLHYFSPVEKMPLVEVIPHATTSDETIATVVTLARKQGKTP 489
           S++ I  +A   +RP+N VG+H+F+PV  MPLVEVI    +S+E +AT V  A+K GK P
Sbjct: 430 STISISLLAQALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSEEAVATTVAYAKKMGKNP 489

Query: 490 IVVKDCAGFYVNRILAPYMNEAAQVLMAGEPIEKLDAALLDFGFPVGPITLLDEVGVDIG 549
           IVV DC GF VNR+L PY    A+++ AG    ++D  +  FG+P+GP  L+D VG+D G
Sbjct: 490 IVVNDCPGFLVNRVLFPYFGGFARLVSAGVDFVRIDKVMEKFGWPMGPAYLMDVVGIDTG 549

Query: 550 AKIMPILVKELGPRFQGP--DVFDVLLKDNRKGRKSGKGFYTY----KGSKKKEVDKSVY 603
                ++ +    R +       D L    R G+K+GKGFY Y    KG  KK  D +V 
Sbjct: 550 HHGRDVMAEGFPDRMKDDRRSAIDALYDAKRLGQKNGKGFYAYETDKKGKPKKVNDPAVL 609

Query: 604 KLLK--LTPESKLNDKEIAMRCLLPMLNEAVRCLDEGIIRSARDGDMGAIFGIGFPPFLG 661
            +LK  +  + +++D++I    ++P+  E VRCL++GI+ +A + DMG I+GIGFPPF G
Sbjct: 610 DVLKPIVYEQREVSDEDIVNWMMIPLCLETVRCLEDGIVETAAEADMGLIYGIGFPPFRG 669

Query: 662 GPFRYMDTLGLTKVVEMMNQHTEKYGERFAPCDGLLTRAGLGEKFY 707
           G  RY+D++G+ + V + +Q+ E  G  + P   L   A  G+ F+
Sbjct: 670 GALRYIDSIGVAEFVALADQYAE-LGALYQPTAKLREMAANGQSFF 714