Pairwise Alignments

Query, 708 a.a., fatty acid oxidation complex subunit alpha FadJ from Vibrio cholerae E7946 ATCC 55056

Subject, 706 a.a., multifunctional fatty acid oxidation complex subunit alpha (RefSeq) from Shewanella amazonensis SB2B

 Score =  800 bits (2065), Expect = 0.0
 Identities = 421/704 (59%), Positives = 514/704 (73%), Gaps = 5/704 (0%)

Query: 7   FQLSFDEQHYAWLAIDVPGEKMNTLQAAFAEEMQAVFATLNEKRGQIKGLIIHSLKPDNF 66
           F LS  +   A L +DVPGE MNTL+A FA E+ A+   +      IKGL++ S K D+F
Sbjct: 5   FSLSRRDDGIALLTMDVPGETMNTLKAQFAPEITAILQEIKAD-SSIKGLVLISGKADSF 63

Query: 67  IAGADVRMLEACQSVHEAQALASQGQQMFQQLADLPFPVVAAIHGPCLGGGLELALACDY 126
           +AGAD+ ML+AC++  +A+ L+ QG  +F +L  L  PVVAAIHG CLGGGLELALAC  
Sbjct: 64  VAGADISMLDACETAEDARLLSRQGHHVFAELEGLNIPVVAAIHGACLGGGLELALACHQ 123

Query: 127 RVCTEDEVTRLGLPEVMLGLLPGSGGTQRLPRLIGLLPALDLILTGKQLRAKKAKKLGVV 186
           RVC++   T LG+PEV LGLLPG GGTQRLPRLIG+  ALDL+LTGKQ+R K+A K+G+V
Sbjct: 124 RVCSDSSKTMLGVPEVQLGLLPGGGGTQRLPRLIGIAKALDLMLTGKQVRPKQAVKMGLV 183

Query: 187 DACVPHSVLLDVAKRLLEEKGHKKRAQVTLPIKEKLLANTDLGRKLIFDQAAKKTQQKTR 246
           D  VP S+LLD A  +    G K R  +  P+  KLL  T +GR ++FDQA K+  +KT+
Sbjct: 184 DDVVPESILLDTAIEMALA-GKKTRKPLKQPLVTKLLEGTPVGRNIMFDQATKQVLKKTQ 242

Query: 247 GNYPAAQAILEVIQYGLEKGMHAGLEYEAKRFAELVMTRESKALRSIFFATTEMKKDLGA 306
           GNYP+   I++ ++ G+ KGM  GLE EA  F  LV T ES ALRSIFFATTEMKK+ GA
Sbjct: 243 GNYPSPLKIIDCVREGMAKGMEKGLEVEAAHFGALVATPESAALRSIFFATTEMKKETGA 302

Query: 307 -DAKPAPVAAVGVLGGGLMGAGISHVTVAKAKTSVRIKDVANDGVLNALNYNYKLFDKQR 365
            DAKP  VA   VLGGGLMG GI+ VT  KAK  VR+KD+++ G+ NAL Y YKL DK  
Sbjct: 303 GDAKPRKVAKAVVLGGGLMGGGIASVTTTKAKVPVRVKDISDKGLSNALGYAYKLLDKGV 362

Query: 366 QRKILTKAQLQAQMSQLSGGTGFVGFDRCDVVIEAVFEDLKLKQQMVADIEANAKPTTIF 425
           +R+ +T A+    M+ ++  T + G    D+V+EAVFEDL LK QMV DIE      TIF
Sbjct: 363 KRRHMTSAERDKLMALMTTTTEYRGVKDADIVVEAVFEDLNLKHQMVRDIERECGEHTIF 422

Query: 426 ATNTSSLPIHQIASQAQRPQNIVGLHYFSPVEKMPLVEVIPHATTSDETIATVVTLARKQ 485
           A+NTSSLPI QIA+ A RP+N++GLHYFSPVEKMPLVEVI H  TS ETIAT V  ARKQ
Sbjct: 423 ASNTSSLPITQIAAAASRPENVIGLHYFSPVEKMPLVEVIAHEKTSPETIATTVAFARKQ 482

Query: 486 GKTPIVVKDCAGFYVNRILAPYMNEAAQVLMAGEPIEKLDAALLDFGFPVGPITLLDEVG 545
           GKTPIVVKDCAGFYVNRILA YMNEAAQ+L+ G+ ++ LD AL+ FGFPVGP+TLLDEVG
Sbjct: 483 GKTPIVVKDCAGFYVNRILALYMNEAAQLLLEGQAVDHLDKALVKFGFPVGPMTLLDEVG 542

Query: 546 VDIGAKIMPILVKELGPRFQGPDVFDVLLKDNRKGRKSGKGFYTY-KGSKK-KEVDKSVY 603
           +D+GAKI PIL KELG RF+ P  FD L+ D+RKGRK+GKGFY Y K +KK K+VD+SVY
Sbjct: 543 IDVGAKISPILEKELGERFKAPAAFDKLMADDRKGRKNGKGFYLYGKAAKKGKKVDESVY 602

Query: 604 KLLKLTPESKLNDKEIAMRCLLPMLNEAVRCLDEGIIRSARDGDMGAIFGIGFPPFLGGP 663
            LL LTP +     EIA RC++ MLNEAVRCL+EGII S RDGD+GAIFGIGFPPFLGGP
Sbjct: 603 SLLGLTPATGKEAGEIAERCVVQMLNEAVRCLEEGIIASPRDGDIGAIFGIGFPPFLGGP 662

Query: 664 FRYMDTLGLTKVVEMMNQHTEKYGERFAPCDGLLTRAGLGEKFY 707
           FRYMDTLG  K+V ++  +  KYG+RFAP   L   A  G+ FY
Sbjct: 663 FRYMDTLGAAKMVRLLEGYQSKYGDRFAPAALLKAMAAEGKTFY 706