Pairwise Alignments

Query, 708 a.a., fatty acid oxidation complex subunit alpha FadJ from Vibrio cholerae E7946 ATCC 55056

Subject, 733 a.a., fatty acid oxidation complex FadJ subunit alpha from Phaeobacter inhibens DSM 17395

 Score =  339 bits (870), Expect = 2e-97
 Identities = 243/728 (33%), Positives = 358/728 (49%), Gaps = 36/728 (4%)

Query: 7   FQLSFDEQHYAWLAIDVPGEKMNTLQAAFAEEMQAVFATLNEKRGQIKGLIIHSLKPDNF 66
           F +  D    A +  D PG+ MN L      ++  +          +KG++I S K D F
Sbjct: 4   FTMKKDADGVAIITWDCPGKTMNVLNGQAMIDLDGLVDDALADDA-VKGIVITSGKKD-F 61

Query: 67  IAGADVRML---------EACQSVHEAQALASQGQQMFQQLADLPF------PVVAAIHG 111
             G D+ +L         E  + + E      +G +  ++    P       PV AA+ G
Sbjct: 62  AGGMDLNVLAKMKEDAGDEPARGLFEGIMKMHEGLRKIERAGMDPKTNKGGKPVAAALPG 121

Query: 112 PCLGGGLELALACDYRVCTEDEVTRLGLPEVMLGLLPGSGGTQRLPRLIGLLPALDLILT 171
             +G GLEL L+       ++   ++GLPE+M+G+ PG+GGT RL R +G + A   +L 
Sbjct: 122 TAVGIGLELPLSTHRIFAADNPKAKIGLPEIMVGIFPGAGGTTRLVRKMGAMAAAPFLLE 181

Query: 172 GKQLRAKKAKKLGVVDACVPHSVLLDVAKRLLEEKGHKKRAQVTLPIKEKLL-----ANT 226
           GK +  KKAK  G++D  V     L  A+  + E    K A +  P   K       A  
Sbjct: 182 GKLVDPKKAKGAGIIDEVVEDP--LAAARAWVLEA---KDADIVKPWDAKGYKMPGGAPY 236

Query: 227 DLGRKLIFDQAAKKTQQKTRGNYPAAQAILEVIQYGLEKGMHAGLEYEAKRFAELVMTRE 286
                + F  AA     KT G +PAA+A+L  +  G        L+ EA+ F  ++M   
Sbjct: 237 HPAGFMTFLGAAAMVHGKTFGAFPAAKALLSAVYEGALVPFDTALKIEARWFTHVLMNPS 296

Query: 287 SKAL-RSIFFATTEMKKDL--GADAKPAPVAAVGVLGGGLMGAGISHVTVAKAKTSVRIK 343
           S+A+ RS+F     ++K     A  +   V  +GVLG G+MGAGI+ V+ A+A   V + 
Sbjct: 297 SEAMIRSLFLNKEALEKGAVRPAGIEDQSVKKIGVLGAGMMGAGIALVS-AQAGMEVVLI 355

Query: 344 DVANDGVLNALNYNYKLFDKQRQRKILTKAQLQAQMSQLSGGTGFVGFDRCDVVIEAVFE 403
           D           Y     DK  +R  +T  + +A +S+++          CD++IEAVFE
Sbjct: 356 DRDQAAADKGKAYTESYLDKGIKRGKVTADKKEAMLSRITATPDLDHLKGCDLIIEAVFE 415

Query: 404 DLKLKQQMVADIEANAKPTTIFATNTSSLPIHQIASQAQRPQNIVGLHYFSPVEKMPLVE 463
           D  +K +M   +EA      IFA+NTS+LPI  +A  + RP+  +G+H+FSPVEKM LVE
Sbjct: 416 DPGVKAEMTKKVEAIIPEDCIFASNTSTLPITDLAEASVRPEQFIGIHFFSPVEKMFLVE 475

Query: 464 VIPHATTSDETIATVVTLARKQGKTPIVVKDCAGFYVNRILAPYMNEAAQVLMAGEPIEK 523
           +I    T D  +A  +   R+  KTPIVV D   FY NR + PY+NE A+++  G     
Sbjct: 476 IIKGEKTGDRAVAKALDYVRQIRKTPIVVNDARFFYCNRCIIPYVNEGARMITEGVAPAL 535

Query: 524 LDAALLDFGFPVGPITLLDEVGVDIGAKIMPILVKELG---PRFQGPDVFDVLLKDNRKG 580
           +D A    GFPVGPI L DE  +D+GAKI       +G   P     D+   + +  R G
Sbjct: 536 IDNAARQLGFPVGPIQLTDETSIDLGAKIARATKAAMGDAYPESAADDLIFWMEEQGRLG 595

Query: 581 RKSGKGFYTYKGSKKKE-VDKSVYKLLKLTPESKLNDKEIAMRCLLPMLNEAVRCLDEGI 639
           RKS  GF+ Y    K++   K + +   L  E   +  E+  R +   + EAVR L+EG+
Sbjct: 596 RKSNAGFFDYDDKGKRQGYWKGMQEKYPLADEQP-DLIEVQERLMFAQVLEAVRALEEGV 654

Query: 640 IRSARDGDMGAIFGIGFPPFLGGPFRYMDTLGLTKVVEMMNQHTEKYGERFAPCDGLLTR 699
           +   R+GD+GAI   GF P+ GGP  ++D +G     E  +Q T KYGERF     L   
Sbjct: 655 LMDIREGDVGAILAWGFAPWSGGPLSWLDIIGTPYAAERCDQLTAKYGERFTCPPLLREM 714

Query: 700 AGLGEKFY 707
           A  G+ FY
Sbjct: 715 AEKGQTFY 722