Pairwise Alignments

Query, 708 a.a., fatty acid oxidation complex subunit alpha FadJ from Vibrio cholerae E7946 ATCC 55056

Subject, 720 a.a., Probable fatty oxidation protein FadB from Mycobacterium tuberculosis H37Rv

 Score =  329 bits (844), Expect = 3e-94
 Identities = 234/721 (32%), Positives = 369/721 (51%), Gaps = 29/721 (4%)

Query: 4   NNAFQLSFDEQHYAWLAIDVPGEKMNTLQAAFAEEMQAVFATLNEKRGQIKGLIIHSLKP 63
           +N  Q   D      L +D P    N +  A+ E M      L  ++  I G+++ S K 
Sbjct: 3   DNTIQWDKDADGIVTLTMDDPSGSTNVMNEAYIESMGKAVDRLVAEKDSITGVVVASAKK 62

Query: 64  DNFIAGADVR-MLEAC-QSVHEAQALASQGQQMFQQLADLPFPVVAAIHGPCLGGGLELA 121
             F AG DV+ M++A  +   +        ++  + L  L  PVVAAI+G  LGGGLE+A
Sbjct: 63  -TFFAGGDVKTMIQARPEDAGDVFNTVETIKRQLRTLETLGKPVVAAINGAALGGGLEIA 121

Query: 122 LACDYRVCTEDEVTRLGLPEVMLGLLPGSGGTQRLPRLIGLLPALDLILT-GKQLRAKKA 180
           LAC +R+  + + ++LGLPEV LGLLPG GG  R  R+ G+  A   +L  G + +  KA
Sbjct: 122 LACHHRIAADVKGSQLGLPEVTLGLLPGGGGVTRTVRMFGIQNAFVSVLAQGTRFKPAKA 181

Query: 181 KKLGVVDACVPH-SVLLDVAKRLLEE--KGHKKRAQVTLPIKE--KLLANTDL--GRKLI 233
           K++G+VD  V     L+  AK  ++E  K +   A V    K+  K+   T    G   I
Sbjct: 182 KEIGLVDELVATVEELVPAAKAWIKEELKANPDGAGVQPWDKKGYKMPGGTPSSPGLAAI 241

Query: 234 FDQAAKKTQQKTRGN-YPAAQAILEVIQYGLEKGMHAGLEYEAKRFAELVMTRESKALRS 292
                   +++ +G   PA +AIL     G +         E++ FA LV  + +K +  
Sbjct: 242 LPSFPSNLRKQLKGAPMPAPRAILAAAVEGAQVDFDTASRIESRYFASLVTGQVAKNMMQ 301

Query: 293 IFFATTEMKKDLGADAK---PAPVAAVGVLGGGLMGAGISHVTVAKAKTSVRIKDVANDG 349
            FF   +     G+  +     P+  +GVLG G+MGAGI++V+ AKA   V +KDV+ + 
Sbjct: 302 AFFFDLQAINAGGSRPEGIGKTPIKRIGVLGAGMMGAGIAYVS-AKAGYEVVLKDVSLEA 360

Query: 350 VLNALNYNYKLFDKQRQRKILTKAQLQAQMSQLSGGTGFVGFDRCDVVIEAVFEDLKLKQ 409
                 Y+ KL  K  +R   T+ +  A +++++       F   D VIEAVFE+ +LK 
Sbjct: 361 AAKGKGYSEKLEAKALERGRTTQERSDALLARITPTADAADFKGVDFVIEAVFENQELKH 420

Query: 410 QMVADIEANAKPTTIFATNTSSLPIHQIASQAQRPQNIVGLHYFSPVEKMPLVEVIPHAT 469
           ++  +IE   +P  I  +NTS+LPI  +A+  +R ++ +G+H+FSPV+KMPLVE+I    
Sbjct: 421 KVFGEIEDIVEPNAILGSNTSTLPITGLATGVKRQEDFIGIHFFSPVDKMPLVEIIKGEK 480

Query: 470 TSDETIATVVTLARKQGKTPIVVKDCAGFYVNRILAPYMNEAAQVLMAGEPIEKLDAALL 529
           TSDE +A V       GKTPIVV D  GF+ +R++  ++NEA  +L  G     ++ A  
Sbjct: 481 TSDEALARVFDYTLAIGKTPIVVNDSRGFFTSRVIGTFVNEALAMLGEGVEPASIEQAGS 540

Query: 530 DFGFPVGPITLLDEVGVDIGAKIMPIL---VKELGPRFQ---GPDVFDVLLKDNRKGRKS 583
             G+P  P+ L DE+ +++  KI       V++ G  +Q      V + +++  R GR  
Sbjct: 541 QAGYPAPPLQLSDELNLELMHKIAVATRKGVEDAGGTYQPHPAEAVVEKMIELGRSGRLK 600

Query: 584 GKGFYTYKGSKKKEVDKSVYKLLKLTPESKLNDKEIAMRCLLPMLNEAVRCLDEGIIRSA 643
           G GFY Y   K+  +   + +  K +  S+   +++  R L     E  +CLDEG++ S 
Sbjct: 601 GAGFYEYADGKRSGLWPGLRETFK-SGSSQPPLQDMIDRMLFAEALETQKCLDEGVLTST 659

Query: 644 RDGDMGAIFGIGFPPFLGGPFRYM------DTLGLTKVVEMMNQHTEKYGERFAPCDGLL 697
            D ++G+I GIGFPP+ GG  +++         G    V    +    YG+RF P + LL
Sbjct: 660 ADANIGSIMGIGFPPWTGGSAQFIVGYSGPAGTGKAAFVARARELAAAYGDRFLPPESLL 719

Query: 698 T 698
           +
Sbjct: 720 S 720