Pairwise Alignments

Query, 708 a.a., fatty acid oxidation complex subunit alpha FadJ from Vibrio cholerae E7946 ATCC 55056

Subject, 709 a.a., multifunctional fatty acid oxidation complex subunit alpha (RefSeq) from Shewanella sp. ANA-3

 Score =  771 bits (1990), Expect = 0.0
 Identities = 404/707 (57%), Positives = 507/707 (71%), Gaps = 8/707 (1%)

Query: 7   FQLSFDEQHYAWLAIDVPGEKMNTLQAAFAEEMQAVFATLNEKRGQIKGLIIHSLKPDNF 66
           F L+  E   A L +DVPGE MNTL+A F  E+  + + + ++   I+GL++ S K D+F
Sbjct: 5   FNLTRREDGIAILMMDVPGETMNTLKAEFGPEISEILSEI-KRDSSIRGLVLISGKKDSF 63

Query: 67  IAGADVRMLEACQSVHEAQALASQGQQMFQQLADLPFPVVAAIHGPCLGGGLELALACDY 126
           +AGAD+ ML+ACQ+  +A+AL+ QG  +F +L  L  PVVAAIHG CLGGGLELALAC  
Sbjct: 64  VAGADISMLDACQTAGDAKALSQQGHVVFNELEALNIPVVAAIHGACLGGGLELALACHQ 123

Query: 127 RVCTEDEVTRLGLPEVMLGLLPGSGGTQRLPRLIGLLPALDLILTGKQLRAKKAKKLGVV 186
           RVC++D  T LG+PEV LGLLPG GGTQRLPRL+G+  ALD++LTGKQ+R K+A K+G+V
Sbjct: 124 RVCSDDGKTMLGVPEVQLGLLPGGGGTQRLPRLVGITTALDMMLTGKQIRPKQALKMGLV 183

Query: 187 DACVPHSVLLDVAKRLLEEKGHKKRAQVTLPIKEKLLANTDLGRKLIFDQAAKKTQQKTR 246
           +  VP ++LL  A  +    G +    V   +  +LL  T  GR +IFDQAAK+  +KT+
Sbjct: 184 NDVVPQTILLQTAVEMALA-GKRTAKPVKKSLVNQLLEGTGFGRNIIFDQAAKQVVKKTQ 242

Query: 247 GNYPAAQAILEVIQYGLEKGMHAGLEYEAKRFAELVMTRESKALRSIFFATTEMKKDLGA 306
           GNYPA   I++ ++ G+ KGM  GLE EA  FAELV+++ES+ALRSIFFATTEMKK+ GA
Sbjct: 243 GNYPAPAKIIDCVRQGMAKGMQKGLEVEASHFAELVVSKESEALRSIFFATTEMKKETGA 302

Query: 307 D-AKPAPVAAVGVLGGGLMGAGISHVTVAKAKTSVRIKDVANDGVLNALNYNYKLFDKQR 365
           + A P  V    +LGGGLMG GI+ VT  KAK   R+KD+   G+ NAL+Y YKL DK  
Sbjct: 303 EGATPRKVKKAVILGGGLMGGGIASVTTTKAKIPARVKDINEKGLSNALSYAYKLLDKGV 362

Query: 366 QRKILTKAQLQAQMSQLSGGTGFVGFDRCDVVIEAVFEDLKLKQQMVADIEANAKPTTIF 425
           +R+ +T A     M+ ++  T + G    D+V+EAVFEDL LK QMV DIE      TIF
Sbjct: 363 KRRHMTPAVRDNLMALMTTTTEYKGVKDADIVVEAVFEDLALKHQMVKDIERECGEHTIF 422

Query: 426 ATNTSSLPIHQIASQAQRPQNIVGLHYFSPVEKMPLVEVIPHATTSDETIATVVTLARKQ 485
           A+NTSSLPI QIA  A RP+N++GLHYFSPVEKMPLVEVI HA TS ETIAT V  ARKQ
Sbjct: 423 ASNTSSLPIGQIAQAASRPENVIGLHYFSPVEKMPLVEVIAHAKTSPETIATTVAFARKQ 482

Query: 486 GKTPIVVKDCAGFYVNRILAPYMNEAAQVLMAGEPIEKLDAALLDFGFPVGPITLLDEVG 545
           GKTPIVV+D AGFYVNRILA YMNEAAQ+L+ G+ IE LD AL+ FGFPVGPITLLDEVG
Sbjct: 483 GKTPIVVQDGAGFYVNRILALYMNEAAQLLLEGQSIEHLDKALVKFGFPVGPITLLDEVG 542

Query: 546 VDIGAKIMPILVKELGPRFQGPDVFDVLLKDNRKGRKSGKGFYTY-----KGSKKKEVDK 600
           +D+GAKI PIL KELG RF+ P  FD LL D+RKGRK+GKGFY Y       SKKK VD+
Sbjct: 543 IDVGAKIAPILEKELGERFKAPAAFDKLLSDDRKGRKNGKGFYQYAAGNKASSKKKAVDE 602

Query: 601 SVYKLLKLTPESKLNDKEIAMRCLLPMLNEAVRCLDEGIIRSARDGDMGAIFGIGFPPFL 660
           SVY +L + P    +   +A RC++ MLNEAVRCLD+GII S RDGD+GAIFGIGFPPFL
Sbjct: 603 SVYAVLGIKPGMDKDLSAVAERCVVQMLNEAVRCLDDGIIASPRDGDIGAIFGIGFPPFL 662

Query: 661 GGPFRYMDTLGLTKVVEMMNQHTEKYGERFAPCDGLLTRAGLGEKFY 707
           GGPF Y+DTLG   +V ++ ++  +YG+RF PC  L   A    +F+
Sbjct: 663 GGPFHYIDTLGADNLVNILERYQAQYGDRFEPCPRLKAMAAEKARFF 709