Pairwise Alignments

Query, 188 a.a., RNA polymerase subunit sigma from Vibrio cholerae E7946 ATCC 55056

Subject, 169 a.a., RNA polymerase subunit sigma-24 from Azospirillum brasilense Sp245

 Score = 66.6 bits (161), Expect = 2e-16
 Identities = 47/140 (33%), Positives = 69/140 (49%), Gaps = 4/140 (2%)

Query: 38  LYRYAYWLCKDRSIAEDLVQETCLRAWKSLDSLLDEKAAKAWLITILRRENARRFERKQF 97
           L RYA  L ++RS AEDLVQE   RA    D+       +AWL TIL   +  +   K  
Sbjct: 15  LRRYARALLRNRSDAEDLVQEALTRAVARADTFKAGTNLRAWLFTILHNVHVNQVRSKAS 74

Query: 98  DLVDIDDHDYEAKY----SDDEHHQNEWLQRQILKLDVEYRELLFLQVVGGFSGEEIADI 153
              ++D    E+K       +E  +   + R +  L  E R++L L  + G   EE+A+ 
Sbjct: 75  RPDEVDVDSVESKLVTPARQEERVELREMMRALDDLPEEQRKVLLLVALEGLKYEEVAET 134

Query: 154 LSLNKNTVMTRLFRARNQLK 173
           L +   TVM+RL RAR  ++
Sbjct: 135 LGVPIGTVMSRLSRAREAVR 154