Pairwise Alignments

Query, 188 a.a., RNA polymerase subunit sigma from Vibrio cholerae E7946 ATCC 55056

Subject, 178 a.a., RNA polymerase sigma-E factor (sigma-24) protein from Sinorhizobium meliloti 1021

 Score = 65.1 bits (157), Expect = 7e-16
 Identities = 50/151 (33%), Positives = 78/151 (51%), Gaps = 4/151 (2%)

Query: 26  KYEALVRAYHRDLYRYAYWLCKDRSIAEDLVQETCLRAWKSLDSLLDEKAAKAWLITILR 85
           + E  +  ++  L+ YA  L +DR  A+D+ QE   RA  +      E A +AWL  ILR
Sbjct: 8   RVERRLEPHYARLFAYAVALSRDRDGAQDIFQECIARALDARSVPETEPAFRAWLFAILR 67

Query: 86  RE--NARRFERKQFDLVDIDDHDY-EAKYSDDEHHQNEWLQRQIL-KLDVEYRELLFLQV 141
               +  R  R++ DL      D   A  + +    + +  RQ   +L  E+RE+L L  
Sbjct: 68  NIWIDQSRLRRRRSDLEQEFVTDLVPAPVAPETVLVDAFSVRQAFTRLSTEHREILALVD 127

Query: 142 VGGFSGEEIADILSLNKNTVMTRLFRARNQL 172
           + GFS EE+A ++++ K TVM+R+ RAR  L
Sbjct: 128 ISGFSYEEVAMMIAVPKGTVMSRVSRARRAL 158