Pairwise Alignments

Query, 188 a.a., RNA polymerase subunit sigma from Vibrio cholerae E7946 ATCC 55056

Subject, 173 a.a., RNA polymerase sigma-E factor (sigma-24) protein from Sinorhizobium meliloti 1021

 Score = 58.5 bits (140), Expect = 6e-14
 Identities = 42/131 (32%), Positives = 66/131 (50%), Gaps = 3/131 (2%)

Query: 52  AEDLVQETCLRAWKSLDSLLDEKAAKAWLITILRRENARRFE---RKQFDLVDIDDHDYE 108
           A+DLVQET LRA +S++      + K+WL TI+R     +++   R+     +  +    
Sbjct: 40  ADDLVQETLLRALRSIEQFEPGTSLKSWLFTIMRNAFRTQYKIRTRESPGSTNCAELPIP 99

Query: 109 AKYSDDEHHQNEWLQRQILKLDVEYRELLFLQVVGGFSGEEIADILSLNKNTVMTRLFRA 168
              S +    N  L+  +  L  E+RE+L L    G S +E ADI      T+ +RL RA
Sbjct: 100 TAPSQEWSVLNGELRSALGALSPEHREVLVLVAGFGMSYKEAADICDCAIGTIKSRLSRA 159

Query: 169 RNQLKEMMDGS 179
           R++L   M G+
Sbjct: 160 RDELTAQMHGN 170