Pairwise Alignments

Query, 188 a.a., RNA polymerase subunit sigma from Vibrio cholerae E7946 ATCC 55056

Subject, 166 a.a., RNA polymerase sigma factor, sigma-70 family from Dechlorosoma suillum PS

 Score = 66.2 bits (160), Expect = 3e-16
 Identities = 43/141 (30%), Positives = 70/141 (49%), Gaps = 2/141 (1%)

Query: 38  LYRYAYWLCKDRSIAEDLVQETCLRAWKSLDSLLDEKAAKAWLITILRRENARRFERKQF 97
           L RYA  L  DR+ A+DLVQ+T  RAW    S  D++  + WL +I+      +  R   
Sbjct: 13  LRRYARALVGDRAAADDLVQDTLERAWSRRRSWQDDRPLRPWLFSIMHNLRLDQLRRPGI 72

Query: 98  DLVDIDDHDYE--AKYSDDEHHQNEWLQRQILKLDVEYRELLFLQVVGGFSGEEIADILS 155
               +D+   E   + +  +  +   L   + +L  E R ++ L  +   S + IA  L+
Sbjct: 73  APQPLDERIPEPGTRPTQSDALELADLAAALYRLPEEQRAVILLVALEDMSYDAIAQTLA 132

Query: 156 LNKNTVMTRLFRARNQLKEMM 176
           + + TVM+RLFR R  L+ +M
Sbjct: 133 IPRGTVMSRLFRGREHLRRLM 153