Pairwise Alignments

Query, 253 a.a., DUF3379 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 234 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

 Score =  125 bits (313), Expect = 1e-33
 Identities = 78/240 (32%), Positives = 127/240 (52%), Gaps = 16/240 (6%)

Query: 11  MDELEFRRKVMSDPKQRDNDTLDMMTSSEANAKFVDDVLQLDKQIAQAFKVDVPDDLADK 70
           MDEL+FRR+   DP  +D + +  M  S  N  FV ++  LD ++  A KVDVP+DLADK
Sbjct: 1   MDELKFRRQAYEDPHNQDPEFVAQMQESAENQAFVAELKSLDAKLTHALKVDVPEDLADK 60

Query: 71  ILFKQTTLVEDEKVIRPQFVRKAMAIAASVAFTAGLLVGQIQWGNLLISPAQASLSDMAV 130
           ++ +Q      ++  +  F+   +A+AAS+AF  G+    ++ G          L++ A+
Sbjct: 61  LILRQQLQQHHKQRRQTGFL---VAMAASIAFIVGISFSLLRLG-------PVDLAEHAL 110

Query: 131 QHVIHEEGFVNRLDEQADMQQINAKMRPFAYKMEGDF---PYHVYYLNHCGFGKDNAVHM 187
            HV H EG   ++D+  +  Q+NA++          F   P  VYY ++C F    ++H+
Sbjct: 111 AHVYH-EGVALQVDQNVNFSQVNAQLASLKNLGHAKFTEQPGKVYYTSYCDFQGVKSLHL 169

Query: 188 VFQGEKGKVTLFFTPIHSAQ--SSLFKQEGMAGIIEPVGNASLILVGEKDENLTNIANKL 245
           V Q EKGKVTLF  PI       + F      G+    G+A ++LVGE   +L+ + +++
Sbjct: 170 VLQAEKGKVTLFIVPIEKRMVLDNTFADGKYQGMGFEAGDAYILLVGEDKTDLSFVKDEI 229