Pairwise Alignments

Query, 428 a.a., long-chain fatty acid transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 423 a.a., Long-chain fatty acid transport protein from Pseudomonas fluorescens FW300-N2E2

 Score =  165 bits (418), Expect = 2e-45
 Identities = 121/422 (28%), Positives = 194/422 (45%), Gaps = 46/422 (10%)

Query: 5   RLFKKSLLAVTVTLATQQAFAAGFQLNAQSATGLGRAFAGDAVIADNAAVMSRNPAAMAL 64
           R+  K+ +++ V LAT Q FA+GF LN QS +G+G  FAG +  A++A+ +  NPA M+ 
Sbjct: 3   RILLKTPMSLAVALATSQVFASGFALNEQSISGMGAGFAGRSSSAEDASTVFGNPAGMSR 62

Query: 65  FDEMALSLGFETITTMIDVKNVSYRGVLGNSVSVQDTDDVGGTSVAPNIHLIVPVNEQFA 124
             +  +SLG  T+ T  D+     R   G     ++  D+  T+  P  + + PV+E +A
Sbjct: 63  LKKEQVSLGAATLFTQSDISQT--RSTFGG----REDGDMVPTTTVPMGYYVKPVDEHWA 116

Query: 125 WGVNAYSNFGTKTEFSDSYPASEYGGLTDVKSFNLGLAGSYRVNKEWSFGAGLDLIYGQG 184
            GV  Y  FG  T++   +    YG  ++V +       SY  N + S G G        
Sbjct: 117 VGVGFYVPFGLITDYGSDFAGRYYGNKSEVTTLTFQPTVSYAFNDKVSIGFG-------P 169

Query: 185 TMKRIAGTSFPASTIVVNPTTVIPARGTSLLNVDKADGWAVGFNLGTVYEMDENNRFGLS 244
           T+ RI+G     S +V NP +  P      L     D  A+GFN G + +  +  R GL+
Sbjct: 170 TINRISG---EISGMVPNPLS--PGSNDGKLK-SNGDDTALGFNAGILVQATDQTRLGLT 223

Query: 245 YR----YSPEFKAK-------------DDYGQEITLPLPDIAEFSGFHKIENTQFAVHYS 287
           Y     Y  + K+K               Y   + +  P+  + S  H++ N  + ++  
Sbjct: 224 YHSKVSYHLDAKSKLTGGIFSVLGVSGRSYDASLDVDTPESVDISLTHQL-NDDWTMYLG 282

Query: 288 VQWIGWSAFDKIEFRNLVTSRSSVGAL---TKGSYDKMYEWQDGWHYSIGGTYYLNSDWT 344
             W  WS F ++   N     S + AL   T G+  +   W D W ++IG  Y LN  W 
Sbjct: 283 STWTRWSRFKELTIEN-----SGLPALLSGTLGTVSEEQNWHDTWAHAIGAAYKLNDQWV 337

Query: 345 LRAGYMYDTS-AQDSRTSISVPDSDRQWLSAGFTYNIDDKSNVDFGFTYLMGKDVAVSEN 403
           LRAG   D S A ++     +P  DR  LS G  +   ++  +D  ++YL  + V ++E 
Sbjct: 338 LRAGLSVDQSPANNTNRGPRIPTGDRTVLSFGAGWTPVEEVTIDVAYSYLQEESVRINET 397

Query: 404 DA 405
            +
Sbjct: 398 SS 399