Pairwise Alignments

Query, 428 a.a., long-chain fatty acid transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 424 a.a., Long-chain fatty acid transport protein from Pseudomonas fluorescens FW300-N2E2

 Score =  163 bits (412), Expect = 1e-44
 Identities = 120/422 (28%), Positives = 194/422 (45%), Gaps = 45/422 (10%)

Query: 5   RLFKKSLLAVTVTLATQQAFAAGFQLNAQSATGLGRAFAGDAVIADNAAVMSRNPAAMAL 64
           ++  K+ L + VTLA+ Q FA+GF LN QS +G+G  FAG + IAD+A+ +  NPA M+ 
Sbjct: 3   KIMLKTTLGLAVTLASTQLFASGFALNEQSISGMGTGFAGRSSIADDASTVFGNPAGMSR 62

Query: 65  FDEMALSLGFETITTMIDVKNVSYRGVLGNSVSVQDTDDVGGTSVAPNIHLIVPVNEQFA 124
                ++ GF  I    D+ + S     G        D V  T V P  + + P+++Q+A
Sbjct: 63  LKRQQVTGGFAAIDASTDINDAS-----GTQSGTNKGDMVPLTGV-PMGYYVKPIDDQWA 116

Query: 125 WGVNAYSNFGTKTEFSDSYPASEYGGLTDVKSFNLGLAGSYRVNKEWSFGAGLDLIYGQG 184
           +G+  Y+ FG  T++ + +    +G  ++VK        SY  N + S G G        
Sbjct: 117 FGLGVYAPFGLITDYENGFQGRSFGSKSEVKVVTFQPTVSYAFNDKVSIGFG-------P 169

Query: 185 TMKRIAGTSFPASTIVVNPTTVIPARGTSLLNVDKADGWAVGFNLGTVYEMDENNRFGLS 244
           T+ RI+G S  +   V      +P  G  +    K D    G+N+G + +  +  R GL+
Sbjct: 170 TINRISG-SLESQLGVPG----LPEAGVEI----KGDDIGYGYNVGVLVQATDTTRVGLT 220

Query: 245 YRYSPEFKAKDD------------------YGQEITLPLPDIAEFSGFHKIENTQFAVHY 286
           Y    ++K +                    Y   + +  P+  +FS   +I N  + V+ 
Sbjct: 221 YHSKVKYKLEGHTEVNPGAGMPAFLLTDGRYDASLDITTPESVDFSVTQQI-NDAWTVYA 279

Query: 287 SVQWIGWSAFDKIEFRNLVTSRSSVGAL--TKGSYDKMYEWQDGWHYSIGGTYYLNSDWT 344
              W  WS   +I   N  TS S  G L  + G+  +   W D W Y+IG +Y LN  W 
Sbjct: 280 GSTWTRWSRLKEITVENEGTS-SGGGLLNPSLGTITEEQNWHDTWAYAIGTSYQLNKQWV 338

Query: 345 LRAGYMYDTS-AQDSRTSISVPDSDRQWLSAGFTYNIDDKSNVDFGFTYLMGKDVAVSEN 403
           LR G  +D +   ++  S  +P  DR   S G  ++  D   +D  ++YL  + V VS +
Sbjct: 339 LRTGLSFDQAPTNNADRSPRIPTGDRTIFSLGAGWSPTDDLTIDVAYSYLKEEKVKVSGS 398

Query: 404 DA 405
           +A
Sbjct: 399 NA 400