Pairwise Alignments

Query, 428 a.a., long-chain fatty acid transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 439 a.a., Long-chain fatty acid transport protein from Pseudomonas fluorescens FW300-N1B4

 Score =  134 bits (338), Expect = 4e-36
 Identities = 103/412 (25%), Positives = 181/412 (43%), Gaps = 40/412 (9%)

Query: 13  AVTVTLATQQAFAAGFQLNAQSATGLGRAFAGDAVIADNAAVMSRNPAAMALFDEMALSL 72
           A+ +  A+  A A G  LN QSA+  G A+AG +  A +A+ +  NPA +       +S 
Sbjct: 26  AMALLSASSIASANGIALNEQSASSAGTAYAGRSSSALDASTIYGNPAGLTKLKRSEISG 85

Query: 73  GFETITTMIDVKNVSYRGVLGNSVSVQDTDDVGGTSVAPNIHLIVPVNEQFAWGVNAYSN 132
           G   ++   D+ +        +S +  +  D     V P  ++  P++E+ + G+  Y+ 
Sbjct: 86  GAAIVSVSDDISDAQ------SSAAGTNKGDSVPLGVVPFAYMSTPLDERLSVGLGLYAP 139

Query: 133 FGTKTEFSDSYPASEYGGLTDVKSFNLGLAGSYRVNKEWSFGAGLDLIYGQGTMKRIAGT 192
            G   ++  S+    +G  +  K   L    +YR+N   S G G  L      ++    T
Sbjct: 140 SGLINDYEGSFQGRYHGSYSTTKEITLQPTIAYRINDYVSIGGGPTLNRFNAKLQNYMAT 199

Query: 193 SFPASTIVVNPTTVIPARGTSLLNVDKADGWAVGFNLGTVYEMDENNRFGLSYRYSPEFK 252
                   +N        G   L   K D  A+G+N+G + + +E  R+G++Y     ++
Sbjct: 200 G------ALN-------NGQDTLVTIKGDDTAIGYNVGLLVDFNEATRWGITYHSKVNYQ 246

Query: 253 AKDD---------------YGQEITLPLPDIAEFSGFHKIENTQFAVHYSVQWIGWSAFD 297
            +                 Y  +I L +P+  + S  H+  N+++  +    W  WS   
Sbjct: 247 LEGHTEVSGSPSVIPLDGKYDTKIDLTMPESVDTSITHRF-NSRWTGYLGTTWTRWSRIQ 305

Query: 298 KIEFRNLVTSRSSVG-ALTKGSYDKMYEWQDGWHYSIGGTYYLNSDWTLRAGYMYDTS-A 355
           KIE  N  +  S++G A   G   +   W D W  ++G +Y LN  W +RAGY YD +  
Sbjct: 306 KIEAIN--SGVSAMGQAAGLGRVAEEMNWHDTWSTAVGASYQLNPQWLIRAGYAYDQAPV 363

Query: 356 QDSRTSISVPDSDRQWLSAGFTYNIDDKSNVDFGFTYLMGKDVAVS-ENDAG 406
            ++  S+ VP  +RQ ++ G  Y+ +    +DF + YL     +V   ND+G
Sbjct: 364 GNADRSVRVPVGNRQAVTLGGAYSPNADLTLDFAYGYLWDSKASVQHSNDSG 415