Pairwise Alignments

Query, 428 a.a., long-chain fatty acid transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 420 a.a., Long-chain fatty acid transport protein from Pseudomonas stutzeri RCH2

 Score =  178 bits (451), Expect = 3e-49
 Identities = 126/424 (29%), Positives = 194/424 (45%), Gaps = 42/424 (9%)

Query: 9   KSLLAVTVTLATQQAFAAGFQLNAQSATGLGRAFAGDAVIADNAAVMSRNPAAMALFDEM 68
           K+ LAV V   + QA AAGF LN QS +G+G +FAG +  AD+A  +  NPA M+     
Sbjct: 7   KTALAVAVGALSTQAMAAGFALNEQSISGMGTSFAGRSSSADDATTLFGNPAGMSRLKRE 66

Query: 69  ALSLGFETITTMIDVKNVSYRGVLGNSVSVQDTDDVGGTSVAPNIHLIVPVNEQFAWGVN 128
            +S G   I    ++KN S    LG  V   +  D+   +  P  + + P+++++A GV 
Sbjct: 67  EVSFGLAAIHAKTEIKNTSATTALGTPVGGSNDGDMVPFTAVPMGYYVKPIDDKWAVGVG 126

Query: 129 AYSNFGTKTEFSDSYPASEYGGLTDVKSFNLGLAGSYRVNKEWSFGAGLDLIYGQGTMKR 188
            Y  FG  T++   Y    +G  ++V+   +    SYR N++ S G G        T+ R
Sbjct: 127 LYVPFGMITDYESGYQGRYHGDYSEVRVITVQPTISYRFNEKLSVGFG-------PTLNR 179

Query: 189 IAGTSFPASTIVVNPTTVIPARGTSLLNVDKADGWAVGFNLGTVYEMDENNRFGLSYRYS 248
           + G        + + T +  A G   +   K D  AVGFN G +YE   + R GL+YR  
Sbjct: 180 VDGE-------LQSATFLGAADGRVKV---KGDDTAVGFNAGILYEFTPHTRMGLTYRSK 229

Query: 249 PEFKAKDD---------------YGQEITLPLPDIAEFSGFHKIENTQFAVHYSVQWIGW 293
            E+  + D               Y   + L  P+  + S  H++ N Q+ ++       W
Sbjct: 230 VEYTLEGDTKLKEGFSQTPLGGKYDASLDLTTPESIDISVTHEL-NDQWTLYAGAMLTRW 288

Query: 294 SAFDKIEFRNLVTSRSSVGALTKGSYDKMYEWQDGWHYSIGGTYYLNSDWTLRAGYMYDT 353
           S F+ I   N       +  + +       EW D W Y+IG +Y LN +WTLR G  +D 
Sbjct: 289 SRFEAIVIENDGLPSGPLNPIVEDQ-----EWHDTWSYAIGTSYKLNREWTLRTGLAFDQ 343

Query: 354 SAQDS-RTSISVPDSDRQWLSAGFTYNIDDKSNVDFGFTYLMGKDVAVSENDAGSKLTAT 412
           S  ++   S  +P  DR  +S G  +N  D   VD  ++YL  +D  V  +   S    T
Sbjct: 344 SPTNNVDRSPRIPSGDRTAVSFGLGWNPTDDITVDLAYSYLWEEDTKVRRD---SPTRGT 400

Query: 413 THAD 416
            +AD
Sbjct: 401 YYAD 404