Pairwise Alignments

Query, 428 a.a., long-chain fatty acid transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 413 a.a., membrane protein involved in aromatic hydrocarbon degradation (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 88.2 bits (217), Expect = 4e-22
 Identities = 101/406 (24%), Positives = 166/406 (40%), Gaps = 63/406 (15%)

Query: 12  LAVTVTLATQQAFAAGFQLNAQSATGLGRAFAGDAVIADNAAVMSRNPAAMALFDEMALS 71
           L +   L    A A+G+ +   SA G     A  A  AD ++V + NPA +       + 
Sbjct: 10  LVLVALLLPLHAHASGYAVYEWSARGTALGGAMVARDADPSSV-AYNPANITDLPGAQVQ 68

Query: 72  LGFETI--TTMIDVKNVSYRGVLGNSVSVQDTDDVGGTSVAPNIHLIVPVNEQFAWGVNA 129
           +G   I     +D K          S S  D D        P  +    +N+ + +G   
Sbjct: 69  VGATAIKPAATMDFK----------SASQTDRDFSDAIWGLPTAYYTQQLNDHYWFGFGV 118

Query: 130 YSNFGTKTEFS--DSYPAS---EYGGLTDVKSFNLGLAGSYRVNKEWSFGAGLDLIYGQG 184
           +S  G  TE++  D++       Y G+  + +FN  LA  +  + ++S   G++  Y   
Sbjct: 119 FSRVGLGTEYAGGDNWAGRYNCSYAGIQSL-TFNPNLAMKF--SDQFSMAVGVEATY--- 172

Query: 185 TMKRIAGTSFPASTIVVNPTTVIPARGTSLLNVDKADGWAVGFNLGTVYEMDENNRFGLS 244
            ++ +  ++ P + +                 +D ADGWA G N G  Y+  +   FGL+
Sbjct: 173 -LRFMYDSTVPLADVKQE--------------ID-ADGWAYGLNAGARYKPYDWLAFGLA 216

Query: 245 YRYSPEFKAKDDY----------------GQEITLPLPDIAEFSGFHKIENTQFAVHYSV 288
           +R   + K   D                 G   T PLP+   F    K  + + ++   V
Sbjct: 217 WRSQIDLKVTGDVDFTRKKVTSPPTISQGGISGTEPLPESVTFGVMVKPID-RLSLEADV 275

Query: 289 QWIGWSAFDKIEFRNLVTSRSSVGALTKGSYDKMYEWQDGWHYSIGGTYYLNSDWTLRAG 348
            W  WSA++ +    +  + S +G     S +K  +W++ W +  G  Y L     LRAG
Sbjct: 276 VWTRWSAYEAL---TMDYNPSLLGMYPTVSKEK--DWKNTWRFQFGAEYALTDSVDLRAG 330

Query: 349 YMYDTS-AQDSRTSISVPDSDRQWLSAGFTYNIDDKSNVDFGFTYL 393
           Y+YD S   D     +VP SDRQ +S G  + +D    VD  + YL
Sbjct: 331 YVYDQSPINDKYEDFAVPCSDRQIVSVGAGWKVDQNWVVDVFYGYL 376