Pairwise Alignments

Query, 428 a.a., long-chain fatty acid transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 404 a.a., outer membrane transport protein, OmpP1/FadL/TodX family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  103 bits (258), Expect = 7e-27
 Identities = 103/439 (23%), Positives = 177/439 (40%), Gaps = 54/439 (12%)

Query: 8   KKSLLAVTVTLATQQAFAAGFQLNAQSATGLGRAFAGDAVIADNAAVMSRNPAAMALFDE 67
           +K LL + + L   QA+AAG+ +   SA G     A  A  AD ++V + NPAA+   + 
Sbjct: 2   RKVLLVLCLALCPLQAWAAGYGVYEWSARGNALGGAMVARDADPSSV-AYNPAAITDLEG 60

Query: 68  MALSLGFETITTMIDVKNVSYRGVLGNSVSVQDTDDVGGTSVAPNIHLIVPVNEQFAWGV 127
             + +G   I     + +        N+   +D +        P  +    +++ + +G 
Sbjct: 61  AQIQMGATAIAPTAKMTS--------NTPGKRDAEFSDSIWGLPTFYYTQQLSDNYWFGF 112

Query: 128 NAYSNFGTKTEF--SDSYPASEYGGLTDVKSFNLGLAGSYRVNKEWSFGAGLDLIYGQGT 185
             +S  G  T++  +D++P         + S +L    + ++  E S   GLD  Y +  
Sbjct: 113 GMFSRVGLGTDYKDTDTWPGRYNCSYAAIHSVSLNPNLAMKLTDELSVAFGLDATYLR-- 170

Query: 186 MKRIAGTSFPASTIVVNPTTVIPARGTSLLNVDKADGWAVGFNLGTVYEMDENNRFGLSY 245
                          +  TT+ P     ++    ADGWA G NLG  Y+  +   FG+++
Sbjct: 171 --------------FMYDTTISPV---DVMQQIDADGWAYGLNLGARYKPYDWLAFGVAW 213

Query: 246 RYSPEFKAKD--DYGQEITLPLPDIAEFSGFHKIENT-----------QFAVHYSVQWIG 292
           R   +       D+ Q+  +P P   +  G   I  +           + ++     W  
Sbjct: 214 RSEMQLTVNGNVDFTQKGAVPAPAARDVRGTEPIPESITFGVMVKPFDKLSLEVDAVWTR 273

Query: 293 WSAFDK--IEFRNLVTSRSSVGALTKGSYDKMYEWQDGWHYSIGGTYYLNSDWTLRAGYM 350
           WSA++   I +   +  +SSV A           W++ W    G  Y L     LRAGY+
Sbjct: 274 WSAYNTLVINYDPALYGKSSVSAEKN--------WKNTWRLQFGAEYALTDSIDLRAGYV 325

Query: 351 YD-TSAQDSRTSISVPDSDRQWLSAGFTYNIDDKSNVDFGFTYLMGKDVAVSENDAGSKL 409
           YD T   D+    +VP SDRQ  + G  + I++   +D  ++YL   D        G   
Sbjct: 326 YDQTPVDDAHEDYAVPCSDRQIATTGIGWKINEAWVLDASYSYLWMTDREYEARSGGIYD 385

Query: 410 TATTHADAILLGLQYSRTF 428
           +    A A + GL  +  F
Sbjct: 386 STREDAHAHMAGLSLTYKF 404