Pairwise Alignments

Query, 428 a.a., long-chain fatty acid transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 427 a.a., outer membrane protein P1, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 98.2 bits (243), Expect = 4e-25
 Identities = 110/450 (24%), Positives = 185/450 (41%), Gaps = 62/450 (13%)

Query: 11  LLAVTVTLA--TQQAFAAGFQLNAQSATG--LGRAFAGDAVIADNAAVMSRNPAAMALFD 66
           LLA  + LA  T  A A GF L    A G  LG +  G A   D+ + ++ NPA +   +
Sbjct: 8   LLAAGLLLAAFTGSASAEGFALYEWGARGNALGGSMVGRA---DDPSAVAFNPAGITQLE 64

Query: 67  EMALSLGFETITTMIDVKNVSYRGVLGNSVSVQDTDDVGGTSVAPNIHLIVPVNEQFAWG 126
              +  GF  I     V+       + +     + +      V P+ ++   +++    G
Sbjct: 65  GTHVMGGFSAIIPSSTVE-------INHGARSYEGEGAFNIWVPPHGYMTTQLSDNMWLG 117

Query: 127 VNAYSNFGTKTEFSDSYPASEYG----GLTDVKSFNLGLAGSYRVNKEWSFGAGLDLIYG 182
           +  Y+ FG  +E+ DS     Y     G+  V SFN  LA  +++  + S   G++++  
Sbjct: 118 MGIYTRFGLGSEYDDSSWGGRYNIYNVGIQTV-SFNPNLA--FKLTDDLSAAIGVEVMGL 174

Query: 183 QGTMKRIAGTSFPASTIVVNPTTVIPARGTSLLNVD-KADGWAVGFNLGTVYEMDENNRF 241
           +  MK+    +  A+    N     PA     ++ D +AD + VG   G  Y +++    
Sbjct: 175 KLDMKKKINPTGKANNAPGNN----PAGD---IDSDLEADSYGVGLTAGLHYRLNDQWAA 227

Query: 242 GLSYRYSPEFKAK--DDYGQEITLPL---------------PDIAEFSGFHKIENTQFAV 284
           G+SY+   + KA+  +D+      PL               PD+  F G       ++++
Sbjct: 228 GVSYKSQVKHKARGTNDFSNVPAGPLQGVYADCDVNGVVILPDMISF-GVVYYPTPEWSI 286

Query: 285 HYSVQWIGWSAFDKIEFRNLVTSRSSVGALTKGSYDKMYEWQDGWHYSIGGTYYLNSDWT 344
                   WS +D +   +     +  GA+         EW D W Y++G  Y       
Sbjct: 287 EAGATLTRWSLYDNLPIYHSAPFYNGAGAMVNSEK----EWNDAWRYNVGVEYKATDWMD 342

Query: 345 LRAGYMYDTS-AQDSRTSISVPDSDRQWLSAGFTYNIDDKSNVDFGFTYLMGKDVAVSEN 403
           LR GY+YD S   D      +P  DRQ  S G  ++ D  + VD  +TY++  +V  S+ 
Sbjct: 343 LRVGYVYDVSPVDDDHVDYLIPTQDRQLYSTGVGFHWDSYT-VDLSYTYIVASEVEYSQR 401

Query: 404 DA-----GSKLTATTHADAILLGLQYSRTF 428
            +     G+     TH    +LGL    TF
Sbjct: 402 TSEGIFEGNSKGGRTH----VLGLSVGYTF 427