Pairwise Alignments

Query, 432 a.a., aromatic hydrocarbon degradation protein from Vibrio cholerae E7946 ATCC 55056

Subject, 423 a.a., Long-chain fatty acid transport protein from Pseudomonas fluorescens FW300-N2E2

 Score =  174 bits (440), Expect = 6e-48
 Identities = 123/445 (27%), Positives = 199/445 (44%), Gaps = 45/445 (10%)

Query: 5   KTLLSCAVAFGLASVSTFTQAAGFQLAEYSATGLGRAYAGEAAMADNASAQWRNPAMLTY 64
           KT +S AVA   + V     A+GF L E S +G+G  +AG ++ A++AS  + NPA ++ 
Sbjct: 7   KTPMSLAVALATSQVF----ASGFALNEQSISGMGAGFAGRSSSAEDASTVFGNPAGMSR 62

Query: 65  LEGTQVSAGAIYVNPNVDVEGTVNHAQLGKTHASSNDFAHDAVIPNFYLSHQLNEQMALG 124
           L+  QVS GA  +    D+  T   +  G       D      +P  Y    ++E  A+G
Sbjct: 63  LKKEQVSLGAATLFTQSDISQT--RSTFGGRE--DGDMVPTTTVPMGYYVKPVDEHWAVG 118

Query: 125 FALGTNYGMETDLGTEFAASHFGNQASVISKEANLNIAYQILPQLSIGGGVRYVMGEGHF 184
                 +G+ TD G++FA  ++GN++ V +      ++Y    ++SIG G       G  
Sbjct: 119 VGFYVPFGLITDYGSDFAGRYYGNKSEVTTLTFQPTVSYAFNDKVSIGFGPTINRISGEI 178

Query: 185 GATAPAKNLIRHPVTNNVMTLPKGTTLKYMEGEDNSWGWQVGSAWQINQDHRVGFAYKSE 244
               P           N ++           G+D + G+  G   Q     R+G  Y S+
Sbjct: 179 SGMVP-----------NPLSPGSNDGKLKSNGDDTALGFNAGILVQATDQTRLGLTYHSK 227

Query: 245 VVMDFEGHAE---------GVSYGSYKPGMMSVTLPATAELASFHQLNDQWAIHASINWT 295
           V    +  ++         GVS  SY   +  V  P + +++  HQLND W ++    WT
Sbjct: 228 VSYHLDAKSKLTGGIFSVLGVSGRSYDASL-DVDTPESVDISLTHQLNDDWTMYLGSTWT 286

Query: 296 DWSSFKELTAVFPEKSDLI--------KSENWEDNYRFALGTTYQYDAKLALRAGVAYDT 347
            WS FKELT        L+        + +NW D +  A+G  Y+ + +  LRAG++ D 
Sbjct: 287 RWSRFKELTIENSGLPALLSGTLGTVSEEQNWHDTWAHAIGAAYKLNDQWVLRAGLSVDQ 346

Query: 348 SAVDDKNRTATIPETDRTWVSVGGSYVATPQLTLDAGFTYIFAKDATINEPRDASDQTAA 407
           S  ++ NR   IP  DRT +S G  +    ++T+D  ++Y+  +   INE    +  T  
Sbjct: 347 SPANNTNRGPRIPTGDRTVLSFGAGWTPVEEVTIDVAYSYLQEESVRINE----TSSTRG 402

Query: 408 AIGGAFTGNVSGNVWLIGVQANYRF 432
           A    +  + SG     G   +YRF
Sbjct: 403 AYSSKYRNSASG----FGTSVSYRF 423