Pairwise Alignments

Query, 432 a.a., aromatic hydrocarbon degradation protein from Vibrio cholerae E7946 ATCC 55056

Subject, 423 a.a., Long-chain fatty acid transport protein from Pseudomonas fluorescens FW300-N2E3

 Score =  160 bits (404), Expect = 9e-44
 Identities = 119/454 (26%), Positives = 206/454 (45%), Gaps = 63/454 (13%)

Query: 5   KTLLSCAVAFGLASVSTFTQAAGFQLAEYSATGLGRAYAGEAAMADNASAQWRNPAMLTY 64
           KT LS AVA  LAS   F  A+GF L E S +G+G  +AG ++ A++AS  + NPA ++ 
Sbjct: 7   KTTLSLAVA--LASTQIF--ASGFALNEQSISGMGTGFAGRSSSAEDASTVFGNPAGMSR 62

Query: 65  LEGTQVSAGAIYVNPNVDVEGTVNHAQLGKTHASSNDFAHDAVIPNFYLSHQLNEQMALG 124
           ++  +V+ G   ++ + D++     A       +  D      +P  Y    +++  A G
Sbjct: 63  IKRQEVTGGLAAIDASSDIKD----AHGAHPGTNKGDMVPFTAVPMGYYVKPIDDHWAFG 118

Query: 125 FALGTNYGMETDLGTEFAASHFGNQASVISKEANLNIAYQILPQLSIGGGVRYVMGEGHF 184
             +   +G+ T+  + F    FG+++ V        ++Y    ++SIG G          
Sbjct: 119 LGVYAPFGLITNYESGFQGGGFGSKSEVKVVTFQPTVSYAFNDRVSIGFG---------- 168

Query: 185 GATAPAKNLIRHPVTNNVMTLPKGTTLKYMEGEDNSWGWQVGSAWQINQDHRVGFAYKSE 244
               P  N I   + ++V     G T   ++G+D + G+  G   Q     R+G  Y S+
Sbjct: 169 ----PTINRIGGTLESDVPLF--GDTHVKIKGDDTALGYNFGVLVQATDTTRLGLTYHSK 222

Query: 245 VVMDFEGHAEGVSYGSYKPGM----------MSVTLPATAELASFHQLNDQWAIHASINW 294
           V    EGH + ++ G+  P            + +  P + + +   QL D W ++A   W
Sbjct: 223 VNYKLEGHTD-ITAGANAPSAFLQSNRYDASLKIETPESVDFSVTQQLTDAWTLYAGSTW 281

Query: 295 TDWSSFKELT----------------AVFPEKSDLIKSENWEDNYRFALGTTYQYDAKLA 338
           T WS  K +T                A+F     + + +NW + + +A+GT+Y+ + +  
Sbjct: 282 TRWSRLKNITVNNEGVTAAQGGVLSPALF---GTITEEQNWHNTWAYAIGTSYKLNKQWV 338

Query: 339 LRAGVAYDTSAVDDKNRTATIPETDRTWVSVGGSYVATPQLTLDAGFTYIFAKDATINEP 398
           LR G+ +D S  ++ +R+  IP  DRT  S+G  Y  T  LT+D  ++Y+  +  T+N  
Sbjct: 339 LRTGLTFDQSPTNNTDRSPRIPTGDRTIFSLGAGYNVTDDLTIDVAYSYLKEEAVTVNH- 397

Query: 399 RDASDQTAAAIGGAFTGNVSGNVWLIGVQANYRF 432
            +A D  +A    +  G         GV A YRF
Sbjct: 398 SNAVDSYSAKYENSSNG--------FGVGATYRF 423