Pairwise Alignments

Query, 432 a.a., aromatic hydrocarbon degradation protein from Vibrio cholerae E7946 ATCC 55056

Subject, 420 a.a., Long-chain fatty acid transport protein from Pseudomonas stutzeri RCH2

 Score =  171 bits (433), Expect = 4e-47
 Identities = 118/445 (26%), Positives = 214/445 (48%), Gaps = 38/445 (8%)

Query: 1   MKTNKTLLSCAVAFGLASVSTFTQAAGFQLAEYSATGLGRAYAGEAAMADNASAQWRNPA 60
           MKT  T L  A+A  + ++ST   AAGF L E S +G+G ++AG ++ AD+A+  + NPA
Sbjct: 1   MKT--TWLKTALAVAVGALSTQAMAAGFALNEQSISGMGTSFAGRSSSADDATTLFGNPA 58

Query: 61  MLTYLEGTQVSAGAIYVNPNVDVEGTVNHAQLGKTHASSND--FAHDAVIPNFYLSHQLN 118
            ++ L+  +VS G   ++   +++ T     LG     SND        +P  Y    ++
Sbjct: 59  GMSRLKREEVSFGLAAIHAKTEIKNTSATTALGTPVGGSNDGDMVPFTAVPMGYYVKPID 118

Query: 119 EQMALGFALGTNYGMETDLGTEFAASHFGNQASVISKEANLNIAYQILPQLSIGGGVRYV 178
           ++ A+G  L   +GM TD  + +   + G+ + V        I+Y+   +LS+G G    
Sbjct: 119 DKWAVGVGLYVPFGMITDYESGYQGRYHGDYSEVRVITVQPTISYRFNEKLSVGFG---- 174

Query: 179 MGEGHFGATAPAKNLIRHPVTNNVMTLPKGTTLKYMEGEDNSWGWQVGSAWQINQDHRVG 238
                     P  N +   + +          +K ++G+D + G+  G  ++     R+G
Sbjct: 175 ----------PTLNRVDGELQSATFLGAADGRVK-VKGDDTAVGFNAGILYEFTPHTRMG 223

Query: 239 FAYKSEVVMDFEGHA---EGVSY---GSYKPGMMSVTLPATAELASFHQLNDQWAIHASI 292
             Y+S+V    EG     EG S    G      + +T P + +++  H+LNDQW ++A  
Sbjct: 224 LTYRSKVEYTLEGDTKLKEGFSQTPLGGKYDASLDLTTPESIDISVTHELNDQWTLYAGA 283

Query: 293 NWTDWSSFKELTAV---FPEK--SDLIKSENWEDNYRFALGTTYQYDAKLALRAGVAYDT 347
             T WS F+ +       P    + +++ + W D + +A+GT+Y+ + +  LR G+A+D 
Sbjct: 284 MLTRWSRFEAIVIENDGLPSGPLNPIVEDQEWHDTWSYAIGTSYKLNREWTLRTGLAFDQ 343

Query: 348 SAVDDKNRTATIPETDRTWVSVGGSYVATPQLTLDAGFTYIFAKDATINEPRDASDQTAA 407
           S  ++ +R+  IP  DRT VS G  +  T  +T+D  ++Y++ +D  +   RD+  +   
Sbjct: 344 SPTNNVDRSPRIPSGDRTAVSFGLGWNPTDDITVDLAYSYLWEEDTKVR--RDSPTR--- 398

Query: 408 AIGGAFTGNVSGNVWLIGVQANYRF 432
              G +  +   +    G   +YRF
Sbjct: 399 ---GTYYADYENSAHGFGAALSYRF 420