Pairwise Alignments

Query, 432 a.a., aromatic hydrocarbon degradation protein from Vibrio cholerae E7946 ATCC 55056

Subject, 452 a.a., membrane protein involved in aromatic hydrocarbon degradation (RefSeq) from Shewanella amazonensis SB2B

 Score =  365 bits (936), Expect = e-105
 Identities = 207/454 (45%), Positives = 273/454 (60%), Gaps = 26/454 (5%)

Query: 1   MKTNKTLLSCAVAFGLASVSTFTQAAGFQLAEYSATGLGRAYAGEAAMADNASAQWRNPA 60
           M   K++L+ AV+  L  ++T   AAGFQLAEYSATGLGRA+AGEAAMADNA+AQ RNPA
Sbjct: 1   MIMKKSVLTFAVSAALMGITTQVNAAGFQLAEYSATGLGRAFAGEAAMADNAAAQARNPA 60

Query: 61  MLTYLEGTQVSAGAIYVNPNVDVEGTVNHAQ--LG----KTHASSNDFAHDAVIPNFYLS 114
           ML YL G QVS G IYV   VDV G V+ A   LG      +A + D A  A+IPNFY S
Sbjct: 61  MLAYLSGRQVSGGGIYVATEVDVTGDVHIASPVLGPQGVTLNADAYDVADSALIPNFYYS 120

Query: 115 HQLNEQMALGFALGTNYGMETDLGTEFAASHFGNQASVISKEANLNIAYQILPQLSIGGG 174
            Q+N+    G A+ +NYG+ T+L    AAS FG+   + + E N NIAY++   +++G G
Sbjct: 121 SQINDNWTWGLAVNSNYGLATELPATHAASLFGHHTEITTVEFNPNIAYRLNDAVTLGAG 180

Query: 175 VRYVMGEGHFGATAP-----AKNLIRHPVTNNVMTLPKGTTLKYMEGEDNSWGWQVGSAW 229
           VR V G+G  GA  P      K     P          GT LK MEG+D S+GWQVG +W
Sbjct: 181 VRIVYGDGSIGAATPYWVGAIKANPNLPAQIAARLPEPGTVLKTMEGDDVSYGWQVGGSW 240

Query: 230 QINQDHRVGFAYKSEVVMDFEGHAEGVSYGSYK----PGMMSVTLPATAELASFHQLNDQ 285
           Q +++HR G AY S V ++  G A G+ Y   +     G + + LPA AEL+SFHQL+D 
Sbjct: 241 QPSENHRFGLAYHSGVELELSGSAAGLVYTGGQNLDIEGYLPLELPAFAELSSFHQLSDD 300

Query: 286 WAIHASINWTDWSSFKELTAVFPE--------KSDLIKSENWEDNYRFALGTTYQYDAKL 337
            A+HAS+NWT WS F  L A FP         +SDL+K EN++D++R A+G+T+  +   
Sbjct: 301 VALHASVNWTQWSVFDRLVAYFPGETKPVGGIESDLVKEENFKDSWRVAVGSTWNVNKDW 360

Query: 338 ALRAGVAYDTSAVDDKNRTATIPETDRTWVSVGGSYVATPQLTLDAGFTYIFAKDATINE 397
            +R+G A D +AVDD+ RT TIP++DR W S+G  Y A+  LT+D   TYI A       
Sbjct: 361 TVRSGFAVDRTAVDDEFRTTTIPDSDRLWFSLGAGYRASENLTVDMAITYIRAHGFA--- 417

Query: 398 PRDASDQTAAAIGGAFTGNVSGNVWLIGVQANYR 431
           P D     A     +F G   G+VWL GVQ +Y+
Sbjct: 418 PIDEHQDLAGLAQVSFNGEAGGSVWLAGVQLSYK 451