Pairwise Alignments

Query, 432 a.a., aromatic hydrocarbon degradation protein from Vibrio cholerae E7946 ATCC 55056

Subject, 429 a.a., Membrane protein involved in aromatic hydrocarbon degradation (NCBI) from Rhodospirillum rubrum S1H

 Score =  211 bits (537), Expect = 4e-59
 Identities = 139/437 (31%), Positives = 215/437 (49%), Gaps = 35/437 (8%)

Query: 10  CAVAFGLASVSTFTQAAGFQLAEYSATGLGRAYAGEAAMADNASAQWRNPAMLTYLEGTQ 69
           C +A  L+  S +  A+GFQL E SA GLG A+AG  A A + S  + NPA LT L+GTQ
Sbjct: 14  CGLAVALSGGSAW--ASGFQLKEQSAEGLGNAFAGATAKAYDPSTAFYNPAGLTRLKGTQ 71

Query: 70  VSAGAIYVNPNVDVEGTVNHAQLGKTHA-SSNDFAHDAVIPNFYLSHQLNEQMALGFALG 128
             +   Y+ P     G+  +A  G T +    D   DA +P+FY  +  N+ +  G A  
Sbjct: 72  ADSVLTYIMPKAHFSGSGTNALGGSTGSIEGGDAVADAAVPSFYGVYSYNDDLKFGIAAN 131

Query: 129 TNYGMETDLGTEFAASHFGNQASVISKEANLNIAYQILPQLSIGGGVRYVMGEGHFGATA 188
             +G+ TD    +A  +   ++ +       ++AY+++   S G    + +G G     A
Sbjct: 132 VPFGLRTDYDKNWAGRYQAIESDLQIVTLTPSVAYRVVGDSSFGD---FSIGGGPVVQFA 188

Query: 189 PAKNLIRHPVTN--NVMTLPKGTTLKYMEGEDNSWGWQVGSAWQINQDHRVGFAYKSEVV 246
             K      +TN  N   L  G     + G D  +G+ +G+ W+  +  R+G  Y+S V 
Sbjct: 189 SVK------LTNAVNNFGLVAGDGRAKVSGSDIGYGFNIGALWEPTETTRIGVNYRSRVE 242

Query: 247 MDFEGHAE--------GVSYGSYKPGMMS-VTLPATAELASFHQLNDQWAIHASINWTDW 297
            +F+G A+         +S G    G  + +T P    + ++H+ + QWA+ A + WT+W
Sbjct: 243 HNFDGDAKYTNVARPLAISRGLVNSGASADLTTPDVVSIGAYHEFDPQWAVTADVAWTNW 302

Query: 298 SSFKELTAVFPEKSDLIK--SENWEDNYRFALGTTYQYDAKLALRAGVAYDTSAVDDKNR 355
           S F EL  +  +K  +I    E+WED    ALG  Y+    +ALR GVAYD + V  K+R
Sbjct: 303 SLFDELK-IENDKGGVITRVDESWEDTMFVALGGIYKPVEDVALRIGVAYDQAPVGKKHR 361

Query: 356 TATIPETDRTWVSVGGSYVATPQLTLDAGFTYIFAKDATINEPRDASDQTAAAIGGAFTG 415
           TA IP+T+R W++ G SY  T   +LDA + +IFA   +INE             G  TG
Sbjct: 362 TARIPDTNRYWLAAGVSYAVTDSFSLDASYAHIFADRVSINE---------TTAQGNLTG 412

Query: 416 NVSGNVWLIGVQANYRF 432
               ++ ++   A  RF
Sbjct: 413 TYDSSIDILSASATLRF 429