Pairwise Alignments

Query, 432 a.a., aromatic hydrocarbon degradation protein from Vibrio cholerae E7946 ATCC 55056

Subject, 449 a.a., membrane protein involved in aromatic hydrocarbon degradation (RefSeq) from Shewanella sp. ANA-3

 Score =  417 bits (1073), Expect = e-121
 Identities = 230/450 (51%), Positives = 293/450 (65%), Gaps = 27/450 (6%)

Query: 5   KTLLSCAVAFGLASVSTFTQAAGFQLAEYSATGLGRAYAGEAAMADNASAQWRNPAMLTY 64
           K LL+ AV   L S +T  QAAGFQLAEYSATGLGRA+AGEAA+ADNAS Q RNPAMLTY
Sbjct: 3   KRLLTLAVTAALLSTTTQVQAAGFQLAEYSATGLGRAFAGEAAIADNASVQGRNPAMLTY 62

Query: 65  LEGTQVSAGAIYVNPNVDVEGTVNHAQ--LGKTHASSN-----DFAHDAVIPNFYLSHQL 117
           LEG Q+SAG IYV PNVDV+G V+ +   LG            D A DA++PNFY S+QL
Sbjct: 63  LEGRQLSAGGIYVMPNVDVKGDVSLSSPLLGPNPVEMKGGDALDVADDALVPNFYYSNQL 122

Query: 118 NEQMALGFALGTNYGMETDLGTEFAASHFGNQASVISKEANLNIAYQILPQLSIGGGVRY 177
           N+Q   G A+ +NYG+ T+L    AA+ FGN+ +V + E N NIAY++   +S+GGGVR 
Sbjct: 123 NDQWTWGLAVNSNYGLSTELPKTHAAAIFGNKTAVTTVEFNPNIAYRVNDAVSVGGGVRI 182

Query: 178 VMGEGHFGATAPA---KNLIRHPVTNNVMTLPKGTTLKYMEGEDNSWGWQVGSAWQINQD 234
           V GEG  GA+ P    +     P   + M  P GT LK M+G+D  +GWQ+G++WQIN  
Sbjct: 183 VYGEGEIGASLPGWVDRIKPALPAQVSAMLPPGGTELKSMKGDDIGYGWQLGTSWQINPA 242

Query: 235 HRVGFAYKSEVVMDFEGHAEGVSYGSYK----PGMMSVTLPATAELASFHQLNDQWAIHA 290
           HRVG AY S V +D EGHA GV Y   +     G + + LPA AEL+S+HQL D WA+HA
Sbjct: 243 HRVGLAYHSGVKLDLEGHASGVIYDGGQNLSIEGYIPLELPAFAELSSYHQLTDNWAMHA 302

Query: 291 SINWTDWSSFKELTAVFPE--------KSDLIKSENWEDNYRFALGTTYQYDAKLALRAG 342
           S+NWTDWS F +L A FP         +SDL+K E++EDN+RFALGTTYQ   +  +RAG
Sbjct: 303 SVNWTDWSVFDQLVAYFPGEVKPKGDLESDLVKEEHFEDNWRFALGTTYQVSNEWLVRAG 362

Query: 343 VAYDTSAVDDKNRTATIPETDRTWVSVGGSYVATPQLTLDAGFTYIFAK-DATINEPRDA 401
           VA D +A  ++ RT TIP++DR W SVG  Y AT  L +D   TYI A  DA INE ++ 
Sbjct: 363 VALDKTAATNEWRTTTIPDSDRLWFSVGAGYQATKNLNVDFALTYIRATGDAPINEQQNL 422

Query: 402 SDQTAAAIGGAFTGNVSGNVWLIGVQANYR 431
            +        +F G  SG+VWL G+Q +Y+
Sbjct: 423 LNLATV----SFNGEASGDVWLAGIQMSYK 448