Pairwise Alignments

Query, 703 a.a., AsmA family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 741 a.a., Uncharacterized protein involved in outer membrane biogenesis from Pseudomonas stutzeri RCH2

 Score =  175 bits (444), Expect = 6e-48
 Identities = 187/748 (25%), Positives = 320/748 (42%), Gaps = 61/748 (8%)

Query: 2   KKLFISLLGLVVLIVGALLALVLLVNPNQFKPLIVEQAKKQTGLDLVIEGDIGWQFFPSI 61
           K L +  LGL++++V A  AL  L +PN +K  I + A+ + GL+L I+GDIGW  FP +
Sbjct: 6   KILGLVFLGLLLILVAAGFALTHLFDPNDYKDEIRDLARSKAGLELDIKGDIGWSLFPWL 65

Query: 62  GFELGKTELKNPQGFASPNLFKVESVGIDVSVMPLLDKQLKIGNIRLDGAEFHLETLKDG 121
           G EL +T L + Q    P    +  +G+ V VMPLL +++++ +I+++G    L   + G
Sbjct: 66  GLELHETTLASAQTPEQP-FADLRMLGLSVRVMPLLSREVQMSDIKVNGLNLTLNRDEKG 124

Query: 122 RSNLDALTQAQSKPASAPATTDSAPASQPSSSEPAAA-----WSIELGGVSVSNAVLEIT 176
           R N + + Q   +P   PA T  A    P  ++ A A      ++++  ++VS+A +   
Sbjct: 125 RGNWEGVGQPAKQPEQ-PAQTPKASEPSPEQADQAPASRNKPLTLDIDSLTVSDARVTYH 183

Query: 177 DKKAGSHTKLYDVQLSVAEFVPDNWTKATFAAKGDKDQQKFAAQGEAE--VRLSADFKQY 234
           D K G       ++L+       +       A    +Q    A+ E +  +R     K+Y
Sbjct: 184 DAKTGQQYSAESIELTTGAIREGSSIPVKLNAFFGSNQPVMRARTELQGALRFDNQLKRY 243

Query: 235 ALRNINLDASFSDPSNQIDS------AKLKLD-TFEFDKANALTFSVAG-------KAAD 280
              ++ L    S    Q  +       +L +D   +  + N+L F+          KA D
Sbjct: 244 QFEDMRLSGEASGEPLQGQTLTFSAQGQLLVDLAAQIAEWNSLKFTANQLRGLGELKARD 303

Query: 281 MKLNAQGSASLMVNQAISKVGLDAL--KLQAELEGAALPQSPMKLSLDSQIAFDLTQNHL 338
           +   A+ S +L V Q   +  L     KL A  +GA L ++ +   L        T N +
Sbjct: 304 LDKEAKISGALTVAQFNLREFLQGTGQKLPAMADGATLSKAELVSRLSG------TPNSI 357

Query: 339 SVLLNKLTANALSFDGKADVTLADIPKVRFNLHSPEIDLDAFLGTKAQESQPAPAKEAAA 398
           ++    L  +  +F G+  V+      +R +L     +LD +L   ++E     A+++  
Sbjct: 358 ALEELTLKLDDSTFTGRLAVSDFARQALRVDLKGDRFNLDRYLPPPSKEQAAEAARKSEV 417

Query: 399 SSSSA--------PATNAP-------AEVEPDLSALKALDVAGEISIDKFKASNAHLQNV 443
            S+ A        P  NAP       A V P L  L+ LD    ++I    A    L   
Sbjct: 418 KSTQASAIGSGTTPLPNAPTQQAWSDATVLP-LEQLRKLDTEVNLAIGSLTAMKIPLDGF 476

Query: 444 KANFAVNRGVVDLKSFTANLYQGSVQASAQVDARKTPATYSVKKQIKGVQVKPLLKDVLN 503
                   G++ L+   A LY G +  SA +D R      +V+ +  GV V+ LL+    
Sbjct: 477 NLKARTRNGLLTLQEMRAGLYGGRLDGSASLDVRPALPLLTVQNRFNGVPVERLLESQGE 536

Query: 504 NEMLEGTGNIDVNVQGQSLTPSGIQKNLVGTVAINFADGAVKGINVAHLIRTHYAKIKGQ 563
           + +++G  N+D +++ Q  +      NL G V     +G +   N+   +    A +  +
Sbjct: 537 DVVVKGLLNLDADLRTQGNSEKAWIDNLNGKVGFIIDNGVLVDANLEQQLCRAIATLNRK 596

Query: 564 NVEEADAVKKTDFSAMTTTLKLNKGEVTTNDLNMQSPLLRIHGEGKANYLQQNVDFLVRT 623
            +      K T F  +   L L  G  +  DL    P L ++G+G  +     +D+  R 
Sbjct: 597 PLASDPRSKDTPFRELKGNLTLRNGVASNPDLKASIPGLTVNGKGDVDLRVLGMDY--RV 654

Query: 624 SIVGTLEGQGGKSLDELRDVT-------IPINISGAWSDPKFRLVFD-DVL-KQKAKKEV 674
            I+  +EG  G   D    V         P+   G          FD D L K  A+   
Sbjct: 655 GIL--IEGDKGAMPDPACQVNERYVGIEWPLRCRGPLELGAKACRFDNDALGKVAARLAG 712

Query: 675 DRGVEKLTDKIKDEDTKKAVDGLLKGLF 702
           ++  EK+ +K+ D+ + +  D  LKGLF
Sbjct: 713 EKLNEKIEEKLGDKVSPELKDA-LKGLF 739