Pairwise Alignments

Query, 703 a.a., AsmA family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 555 a.a., outer membrane protein assembly protein from Sinorhizobium meliloti 1021

 Score =  136 bits (343), Expect = 2e-36
 Identities = 113/441 (25%), Positives = 199/441 (45%), Gaps = 23/441 (5%)

Query: 267 ANALTFSVAGKAADMKLNAQGSASLMVNQAISKVGLDALKLQAELEGAALPQSPMKLSLD 326
           A  +   +  K  D  L+  G A+L    A  K+G     L A L G     +     L 
Sbjct: 52  AEGIPLKLQVKMPDANLSLDGKAALAGTYA-GKLGFSTADLSAFLAGLGQSGAESIGPLA 110

Query: 327 SQIAFDLTQNHLSVLLNKLTANALSFDGKADVTLADIPKVRFNLHSPEIDLDAFLGTKAQ 386
                D     +S     ++ N++   G   V      K+   L+  E+DL    G ++ 
Sbjct: 111 FNGHVDAGATGVSFQEASISVNSVEGAGSGSVEFTAPLKIMTALNFDELDLAQLAGAQS- 169

Query: 387 ESQPAPAKEAAASSSSAPATNAPAEVEPDLSALKALDVAGEISIDKFKASNAHLQNVKAN 446
                PA +A A++ + PA     +V  DLSAL+++D   +++  K          V  +
Sbjct: 170 -----PALQAKAATGAEPA-----DVPLDLSALRSIDATIKVNAKKLGYGKVFAGPVATS 219

Query: 447 FAVNRGVVDLKSFTANLYQGSVQASAQVDARKTPATYSVKKQIKGVQVKPLLKDVLNNEM 506
             V+ GV  L    A  Y G V AS + D+ ++  + ++K  I G    PLL D+   + 
Sbjct: 220 LVVSDGVASLTLPEAPFYGGHVVASLRADSSQSEPSIALKTSISGASAAPLLTDMAGFKH 279

Query: 507 LEGTGNIDVNVQGQSLTPSGIQKNLVGTVAINFADGAVKGINVAHLIRTHYAKIKGQNVE 566
           LEG+   + +V G   T   + K+L G   + F+DGA++GI++A+ +  +   +     +
Sbjct: 280 LEGSLKAEFDVTGAGRTSGALAKSLQGNANVGFSDGAIRGIDIAN-VYNNLVSLMTSGFK 338

Query: 567 EADAVKKTDFSAMTTTLKLNKGEVTTNDLNMQSPLLRIHGEGKANYLQQNVDFLVRTSIV 626
           + D  K T F+ +  +  +  G   T DL +  PL+R+ G G A+  Q  ++F +   +V
Sbjct: 339 Q-DESKATTFTELGASFAIEGGVARTEDLKLVGPLIRMTGNGAADLAQSTLNFRLEPRLV 397

Query: 627 GTLEGQGGKSLDELRDVTIPINISGAWSDPKFRLVFDDVLKQK----AK-KEVDRGVEKL 681
            +L+GQG +   +   + +P+ + G+++ P+      D+LK      AK K+    ++KL
Sbjct: 398 ASLKGQGAEISTD--GIGVPVVVEGSFAAPRIYPDLSDLLKNPDAALAKLKDFGLPIDKL 455

Query: 682 --TDKIKDEDTKKAVDGLLKG 700
              D + ++    AV  LL G
Sbjct: 456 HIGDLLNEDGAGAAVKDLLGG 476