Pairwise Alignments

Query, 703 a.a., AsmA family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 604 a.a., AsmA protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  335 bits (858), Expect = 5e-96
 Identities = 236/695 (33%), Positives = 347/695 (49%), Gaps = 102/695 (14%)

Query: 1   MKKLFISLLGLVVLIVGALLALVLLVNPNQFKPLIVEQAKKQTGLDLVIEGDIGWQFFPS 60
           +K +F  +  + VL+V   L + L+ +PN FKP++V+  K+QTG DLVIE  + WQFFPS
Sbjct: 4   IKWIFAGIAAIAVLVV---LYITLIFDPNDFKPMLVDAVKEQTGRDLVIEEPLSWQFFPS 60

Query: 61  IGFELGKTELKNPQGFASPNLFKVESVGIDVSVMPLLDKQLKIGNIRLDGAEFHLETLKD 120
           IG  L    L NP+GF   ++  V+ V  +V ++PLL + ++I  +RLDGA+  L T K 
Sbjct: 61  IGIRLAGVSLSNPEGFKEAHMMAVKEVVAEVKLLPLLSRDVQIDQLRLDGAKLTLVTTKQ 120

Query: 121 GRSNLDALTQAQSKPASAPATTDSAPASQPSSSEPAAAWSIELGGVSVSNAVLEITDKKA 180
           G+S+LD LT   +  A  PA     P             +I +GG+++S+  + + D+ A
Sbjct: 121 GKSSLDGLT-GNTTSADKPADVKQGPGLN----------AISIGGINISDTSITLIDEAA 169

Query: 181 GSHTKLYDVQLSVAEFVPDNWTKATFAAKGDKDQQKFAAQGEAEVRLSADFKQYALRNIN 240
           GS        L++ EF P       FA   D    K   +GEA + +S  F   +L  +N
Sbjct: 170 GSSQTFTLSSLTLGEFTPGKAAPLAFAFGADLPDMKVKGEGEATLTVSEAFNALSLVGLN 229

Query: 241 LDASFSDPSNQIDSAKLKLDTFEFDKANALTFSVAGKAADMKLNAQGSASLMVNQAISKV 300
           L+ +    S                   A+T   AG  AD+ L A+           +K+
Sbjct: 230 LEVNAQGNSL---------------PKGAVTVEFAG-GADVALEAK----------TAKL 263

Query: 301 GLDALKLQAELEGAALPQSPMKLSLDSQIAFDLTQNHLSVLLNKLTANALSFDGKADVTL 360
            +D L L  ++EG                                 A A ++  K     
Sbjct: 264 TVDKLTLM-DIEGKG-------------------------------AIAANYGKK----- 286

Query: 361 ADIPKVRFNLHSPEIDLDAFLGTKAQESQPAPAKEAAASSSSAPATNAPAEVEPDLSALK 420
             +P V   L    ID+DA LGT+         K    + S+AP T   A+ EPDLS +K
Sbjct: 287 --VPFVDVELAFGAIDVDAILGTE---------KSQTKADSTAPDT---AQKEPDLSGMK 332

Query: 421 ALDVAGEISIDKFKASNAHLQN--VKANFAVNRGVVDLKSFTANLYQGSVQASAQVDARK 478
           A+D   ++ I   K +     +  ++AN A   GV+ +    A+LY G V ASA +D RK
Sbjct: 333 AVDAKLKLDIAAVKVAGLSTADWALRANLA--GGVLKVDELKASLYGGKVGASATLDGRK 390

Query: 479 TPATYSVKKQIKGVQVKPLLKDVLNNEMLEGTGNIDVNVQGQSLTPSGIQKNLVGTVAIN 538
            PA YS  K I GVQ+ PLLKD    ++L GT N D+  +G  L    I++NL       
Sbjct: 391 VPAVYSFNKAITGVQILPLLKDAAEVDLLAGTANFDIQGKGAGLLADNIKRNLNANGKFE 450

Query: 539 FADGAVKGINVAHLIRTHYAKIKGQ-NVEEADAVKKTDFSAMTTTLKLNKGEVTTNDLNM 597
            ADGA+ G+NV  +IR   AK+KG  N       KKTDFS++T +L +  G+    DL M
Sbjct: 451 VADGALYGVNVPQMIRDAQAKLKGDLNAAAGGEEKKTDFSSLTGSLNIAAGKANNPDLLM 510

Query: 598 QSPLLRIHGEGKANYLQQNVDFLVRTSIVGTLEGQGGKSLDELRDVTIPINISGAWSDPK 657
            SPLLRI G+G A+ + + +D+ + T +VG+LEGQGG +   L  + IP+ I+G++++PK
Sbjct: 511 LSPLLRISGQGGADLMAETLDYKLATKVVGSLEGQGGDT--ALAGIEIPLAITGSFTEPK 568

Query: 658 FRLVFDDVLKQKAKKEVDRGVEKLTDKIKDEDTKK 692
           F L  + +LK + K E D    KL DK+KD   KK
Sbjct: 569 FALDTEALLKGQLKGETD----KLKDKLKDSLFKK 599