Pairwise Alignments

Query, 703 a.a., AsmA family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 614 a.a., AsmA family protein (RefSeq) from Shewanella loihica PV-4

 Score =  330 bits (847), Expect = 1e-94
 Identities = 219/696 (31%), Positives = 342/696 (49%), Gaps = 93/696 (13%)

Query: 1   MKKLFISLLGLVVLIVGALLALVLLVNPNQFKPLIVEQAKKQTGLDLVIEGDIGWQFFPS 60
           +K L I    L +L++  L    L+ +PN FKP IVE  KKQTG DLVI+ D+ W FFPS
Sbjct: 4   VKWLLIVFASLFLLLIAYL---TLIFDPNDFKPQIVEAVKKQTGRDLVIKQDLSWTFFPS 60

Query: 61  IGFELGKTELKNPQGFASPNLFKVESVGIDVSVMPLLDKQLKIGNIRLDGAEFHLETLKD 120
           IG  LG   L NP+GF    + KV+ +  +V++MPLL K+++I  + LDG   + ++ K+
Sbjct: 61  IGIALGDISLSNPEGFKHDTMLKVDGIVAEVALMPLLSKEVEIAQLNLDGLTLNFDSYKN 120

Query: 121 GRSNLDALTQAQSKPASAPATTDSAPASQPSSSEPAAAWSIELGGVSVSNAVLEITDKKA 180
           GRS++D LT    K   A   T S  A+Q S        S+ +GG++++N  + + D+  
Sbjct: 121 GRSSMDGLTSTGEKADKAGDKTGSDGAAQVS----VQLSSLNIGGIAITNTQVNLYDEAT 176

Query: 181 GSHTKLYDVQLSVAEFVPDNWTKATFAAKGDKDQQKFAAQGEAEVRLSADFKQYALRNIN 240
           G    L    L++ EF    +    +     + + K ++QG+ ++++     + A+++  
Sbjct: 177 GKTQALTLESLTLGEFSLGQFADLGYKFSMTQPEMKVSSQGKGQIKVDPSLAKIAIKDFE 236

Query: 241 LDASFSDPSNQIDSAKLKLDT-FEFDKANALTFSVAGKAADMKLNAQGSASLMVNQAISK 299
           ++ S    +       + L T  E D  NA T ++                      +S 
Sbjct: 237 IENSLEGDAIPNKRMNINLTTQLELDN-NAKTMAL---------------------VLSS 274

Query: 300 VGLDALKLQAELE---GAALPQSPMKLSLDSQIAFDLTQNHLSVLLNKLTANALSFDGKA 356
           + ++ +K Q ++    GA +P     +S                             G  
Sbjct: 275 LNVEQIKAQGKMSVNYGAKVPDVVASMSF----------------------------GDV 306

Query: 357 DVTLADIPKVRFNLHSPEIDLDAFLGTKAQESQPAPAKEAAASSSSAPATNAPAEVEPDL 416
           DVT             P +  D   GTK ++       + A    +APA       EPDL
Sbjct: 307 DVT-------------PFMAKDD--GTKGED-------KTAKGEGTAPAK------EPDL 338

Query: 417 SALKALDVAGEISIDKFKASNAHLQNVKANFAVNRGVVDLKSFTANLYQGSVQASAQVDA 476
           S +KA+++  ++      A     +N      +  GV+D+   +A LYQG + ASAQ+D 
Sbjct: 339 SGMKAVNLKLDLDAKSVTADKIKTENWLMKLTLKNGVLDVSQLSAELYQGKLLASAQLDG 398

Query: 477 RKTPATYSVKKQIKGVQVKPLLKDVLNNEMLEGTGNIDVNVQGQSLTPSGIQKNLVGTVA 536
           RK  A+Y   K+I G++V+PLL D    +ML GT N +V   G SL P  I++NL     
Sbjct: 399 RKPVASYRFNKKISGIKVRPLLTDAAEVDMLAGTTNFEVTGSGYSLIPDNIKRNLDAKGQ 458

Query: 537 INFADGAVKGINVAHLIRTHYAKIKGQNVEEADAVKKTDFSAMTTTLKLNKGEVTTNDLN 596
              ADGA+ G+N+  ++R   AK+ G     +   KKTDF+++T +  + KG V   DLN
Sbjct: 459 FEIADGALYGVNIPQMLRDAKAKLGGNLNAASSGEKKTDFTSLTGSFTVAKGIVNNPDLN 518

Query: 597 MQSPLLRIHGEGKANYLQQNVDFLVRTSIVGTLEGQGGKSLDELRDVTIPINISGAWSDP 656
           M SPL+R+ G+G  N L + +D+ ++TS+VG+LEGQGG   D L  + IP  I+G  S+P
Sbjct: 519 MASPLIRLQGKGNVNLLSEAIDYALKTSVVGSLEGQGGAEKDVLYGIEIPFAIAGTISEP 578

Query: 657 KFRLVFDDVLKQKAKKEVDRGVEKLTDKIKDEDTKK 692
           KF L    +   K KKE     EK TD++KD+  KK
Sbjct: 579 KFSLDTAALFDAKLKKE----TEKATDELKDKLFKK 610