Pairwise Alignments

Query, 703 a.a., AsmA family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 615 a.a., outer membrane assembly protein AsmA from Klebsiella michiganensis M5al

 Score =  121 bits (304), Expect = 9e-32
 Identities = 118/550 (21%), Positives = 220/550 (40%), Gaps = 34/550 (6%)

Query: 155 PAAAWSIELGGVSVSNAVLEITDKKAGSHTKLYDVQLSVAEFVP-DNWTKATFAAKG-DK 212
           P  +  +++  V +  AV+++T K     +K        A  VP DN        +G   
Sbjct: 93  PLISHQLQVKQVMLKGAVIQLTPKTEAVRSK-------GAPVVPHDNTLPQVPEDRGWSY 145

Query: 213 DQQKFAAQGEAEVRLSADFKQYALRNINLDASFSDPSNQIDSAKLKLDTFEFDKANALTF 272
           D QK             D +Q  +R+I L                +++  + D A + T 
Sbjct: 146 DVQKLQIADSVLFFQHEDGEQVTVRDIRLQMEQDSSHRATVDFSGRVNRDQRDLALSFTA 205

Query: 273 SVAGKAADMKLNAQGSASLMVNQAISKVGLDALKLQAELEGAALPQSPMKLSLDSQIAFD 332
            V G      L A                 D  +L  +L GA LP   +      Q ++ 
Sbjct: 206 QVQGGDYPHSLKA-----------------DISQLNWQLRGAELPPEGISGQASMQASWF 248

Query: 333 LTQNHLSVLLNKLTANALSFDGKADVTLADIPKVRFNLHSPEIDLDAFLGTKAQESQPAP 392
                LS     LTAN  +  G   V L   P    NL +  ++LD+ L   +       
Sbjct: 249 EDAKKLSFDKLNLTANGSTVAGNGSVVLGQQPDWTLNLQAGTLNLDSLLSHPSASDNNGV 308

Query: 393 AKEAAASSSSAPATNAPAEVEPDLSALKALDVAGEISIDKFKASNAHLQNVKANFAVNRG 452
            ++  + +       A   ++ D ++L+  +    I+ ++ +    H   VK++ +  +G
Sbjct: 309 NQQGQSQARQLRPVIADNGIQQDYNSLRGFNARLSITAEQLQWRGMHFTQVKSDISNQQG 368

Query: 453 VVDLKSFTANLYQGSVQASAQVDARKTPATYSVKKQIKGVQVKPLLKDVLNNEMLEGTGN 512
           ++ +     NL  G +     +DAR      S + Q+  V++  +LK    +  L G  +
Sbjct: 369 LLTIHQMQGNLDGGRLSLPGSLDARGETPRASFEPQLDNVEIGSILKAFNYSINLTGKLS 428

Query: 513 IDVNVQGQSLTPSGIQKNLVGTVAINFADGAVKGINVAHLIRTHYAKIKGQNVE-EADAV 571
           +     G  +     +++  G   I   D   +G+N   L++   A  +  NV+ + +  
Sbjct: 429 LTGEFSGGKIDADEFRRSWQGQAQIQMTDTRTEGLNFQQLVQ--QAVERSTNVQAQENYD 486

Query: 572 KKTDFSAMTTTLKLNKGEVTTNDLNMQSPLLRIHGEGKANYLQQNVDFLVRTSIVGTLEG 631
             T   +++T   L+ G+VT   +  QS L+ + G+G+ N L+++ D      ++G  +G
Sbjct: 487 NATRLDSVSTEFALDNGQVTLKGMQGQSELMALTGQGELNLLKEDCDMRFNVRVLGGWKG 546

Query: 632 QGGKSLDELRDVTIPINISGAWSDPKFRLVFDDVLKQ----KAKKEVDRGVEKLTDKIKD 687
           +  K +D L+   IP+ I G W    + L  D +L++    +AKK +    E+  +    
Sbjct: 547 E-SKLIDRLKQTAIPLRIYGNWQTLSYSLQVDQILRKQLQDEAKKRLSEWAERNKNTQDG 605

Query: 688 EDTKKAVDGL 697
           +D KK +D L
Sbjct: 606 KDVKKLLDKL 615



 Score = 84.7 bits (208), Expect = 1e-20
 Identities = 79/314 (25%), Positives = 141/314 (44%), Gaps = 55/314 (17%)

Query: 1   MKKLFISLLGLVVLIVGALLALVLLVNPNQFKPLIVEQAKKQTGLDLVIEGDIGWQFFPS 60
           M+++  +L+ L+ ++V  L ALVLLVNPN F+  +V++   ++G  L + G + W  +P 
Sbjct: 1   MRRILTTLMILLAVVVAGLTALVLLVNPNDFRAYMVKEVADRSGYQLELNGPLRWHVWPQ 60

Query: 61  IGFELGKTELKNPQGFASPNLFKVESVGIDVSVMPLLDKQLKIGNIRLDGAEFHLETLKD 120
           +    G+  L  P G A P + + +++ +DV ++PL+  QL++  + L GA   L     
Sbjct: 61  LSILSGRMTLTAP-GAAEP-VIRADNMRLDVGLLPLISHQLQVKQVMLKGAVIQL----- 113

Query: 121 GRSNLDALTQAQSKPASAPATTDSAPASQPSSSEPAA----AWSIELGGVSVSNAVLEIT 176
                         P +    +  AP     ++ P       WS ++  + ++++VL   
Sbjct: 114 -------------TPKTEAVRSKGAPVVPHDNTLPQVPEDRGWSYDVQKLQIADSVL-FF 159

Query: 177 DKKAGSHTKLYDVQLSVAEFVPDNWTKAT--FAAKGDKDQQKFAAQGEAEVR-------L 227
             + G    + D++L + +   D+  +AT  F+ + ++DQ+  A    A+V+       L
Sbjct: 160 QHEDGEQVTVRDIRLQMEQ---DSSHRATVDFSGRVNRDQRDLALSFTAQVQGGDYPHSL 216

Query: 228 SADFKQYALRNINLDASFSDPSNQIDSAKLKLDTFE------FDK----ANALTFS---- 273
            AD  Q    N  L  +   P      A ++   FE      FDK    AN  T +    
Sbjct: 217 KADISQL---NWQLRGAELPPEGISGQASMQASWFEDAKKLSFDKLNLTANGSTVAGNGS 273

Query: 274 -VAGKAADMKLNAQ 286
            V G+  D  LN Q
Sbjct: 274 VVLGQQPDWTLNLQ 287