Pairwise Alignments

Query, 703 a.a., AsmA family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 832 a.a., cell envelope biogenesis protein AsmA from Burkholderia phytofirmans PsJN

 Score = 56.6 bits (135), Expect = 5e-12
 Identities = 47/203 (23%), Positives = 86/203 (42%), Gaps = 38/203 (18%)

Query: 3   KLFISLLGLVVLIVGALLALVLLVNPNQFKPLIVEQAKKQTGLDLVIEGD--IGWQ---- 56
           K+   LL ++V+++ AL   +L  + N+ +P I ++  +  G    I GD  +GW+    
Sbjct: 13  KIIAWLLAIIVILIVALTIFILTFDWNRARPYINDKVTQAIGRPFAINGDLKVGWRHPVG 72

Query: 57  ------FFPSIGFELGKTELKNPQGFASPNLFKVESVGIDVSVMPLLDKQLKIGNIRLDG 110
                 + P   F      + NP     P+   ++ +   V V+PLL   + I  I L  
Sbjct: 73  ETGWRGWVPWPRFSAANITVGNPDWTKQPHFATLDEIDFQVKVLPLLAHDIVIPTINLVN 132

Query: 111 AEFHLETLKDGRSNLDALTQAQSKPASAPATTDSAPASQPSSSEPAAAWSIELGGVSVSN 170
               LE + DGR+N                T   A +S PS       W ++L  ++ + 
Sbjct: 133 PSVDLERVLDGRNNW---------------TFKLASSSGPSE------WKLDLHDIAFAK 171

Query: 171 AVLEITDKKAGSHTKLYDVQLSV 193
             + ++D++     K  D+Q++V
Sbjct: 172 GNIALSDQQ-----KKVDLQMAV 189



 Score = 35.8 bits (81), Expect = 9e-06
 Identities = 126/651 (19%), Positives = 229/651 (35%), Gaps = 101/651 (15%)

Query: 45  LDLVIEGDIGWQFFPSIGFELGKTELK---NPQGFASPNLF---KVESVGIDVSVMPLLD 98
           L+ V++G   W F   +    G +E K   +   FA  N+    + + V + ++V   L 
Sbjct: 137 LERVLDGRNNWTF--KLASSSGPSEWKLDLHDIAFAKGNIALSDQQKKVDLQMAV-DTLG 193

Query: 99  KQLKIGNI--RLDGAEFHLETLKDGRSNLDALTQ-AQSKPASAPATTDSAPASQPSSSEP 155
           + + IG    + + A         G+S  + LTQ A ++ AS  A   +A AS  SS+E 
Sbjct: 194 QPIPIGEAMKQQEAASRSSSAQTIGKSGANKLTQQANAQAASEAAAASAAAASGASSTEI 253

Query: 156 AAAWSIELGGVS----------VSNAVLE------ITDKKAGSHTKLYDVQLSVAEFVPD 199
           +A+ +    G S           S AV        +    A S +   D Q    + +P 
Sbjct: 254 SASGTTAATGASGGLVAGGSRGASEAVAAGASGAVVASAPASSASGASDAQAGAKQEIPP 313

Query: 200 ---NWTKATFAAKGDKDQQKFAAQGEAEVRLSADFKQYALRNINLDASFSDPSNQIDSAK 256
               WT      KG  ++   +  G+    L+             DA+   P      A 
Sbjct: 314 YAIGWT-----VKGTYNKTPVSGSGKVGGVLALQ-----------DANRPFPVQ----AD 353

Query: 257 LKLDTFEFDKANALTFSVAGKAADMKLNAQGSASLMVNQAISKVGLDALKLQAELEGAAL 316
           +K           +T      A D++L  QG++   +                 L G  L
Sbjct: 354 VKAGDLHVGLVGTITDPAHLAAVDLRLWLQGNSMARLYS---------------LTGVTL 398

Query: 317 PQSPMKLSLDSQIAFDLTQNHLSVLLNKLTANALSFDGKADVTLA---DIPKVRFNLHSP 373
           P +P   + + ++      +         T      D    +T       P ++  L S 
Sbjct: 399 PDTP-PYATEGRLVGQFKSSGNVFKYENFTGRVGGSDINGSLTYTAREPRPLLQGELVSH 457

Query: 374 EIDLDAFLGTKAQESQPAPAKEAAASSSSAPATNAPAEVEPDLSALKALDVAGEISIDKF 433
            +           +S  + AK   A++  +       E   D    KA+D   + +  + 
Sbjct: 458 LLQFSDLAPVIGADSNASKAKRGDATAQPSNKVLPVEEFRTD--RWKAIDADVKFTGRRI 515

Query: 434 -KASNAHLQNVKANFAVNRGVVDLKSFTANLYQGSVQASAQVDARKTPATYSVKKQIKGV 492
            K  N  + ++  +  +  GV+ L+     +  GS+ +   +D   TP         + +
Sbjct: 516 VKDVNLPITDLYTHVVMTDGVLSLEPLKFGVAGGSLASDIHLDGSATPLKGRFATSARHL 575

Query: 493 QVKPLLKDVLNNEMLEGTGNIDVNVQGQSLTPSGIQKNLVGTVAINFADGAVK------- 545
           ++K L  +    +   G  N D  +     +P+ +  +  G V     DG V        
Sbjct: 576 KLKQLFPNFKTMQNALGEINGDAALTATGNSPAALAASSNGEVKALVTDGTVSRLLMEAA 635

Query: 546 GINVAHLIRTHYAKIKGQNVEEADAVKKTDFSAMTTTLKLNKGEVTTNDLNMQSPLLRIH 605
           G+NVA+++   Y K+ G    + +     DF A    L+     + T+D         I+
Sbjct: 636 GLNVANVV---YEKLFGNRDVKINCA-AADFVATNGVLESRVFALDTDD-------AVIN 684

Query: 606 GEGKANYLQQNVDFLVRTSIVGTLEGQGGKSLDELRDVTIPINISGAWSDP 656
            +G  N   +++D       +G      G  +  LR    P+ + G + DP
Sbjct: 685 IDGNVNLRDESMD-------LGVHPHTKGFRVFSLRS---PLYVKGTFKDP 725