Pairwise Alignments

Query, 703 a.a., AsmA family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 606 a.a., AsmA protein (RefSeq) from Shewanella sp. ANA-3

 Score =  357 bits (917), Expect = e-103
 Identities = 228/675 (33%), Positives = 341/675 (50%), Gaps = 86/675 (12%)

Query: 11  LVVLIVGALLALVLLVNPNQFKPLIVEQAKKQTGLDLVIEGDIGWQFFPSIGFELGKTEL 70
           LV L+V   L L +  +PN FKP IV   KKQTG +LVI  D+ W FFP++G  LG   L
Sbjct: 11  LVTLVVAVTLYLTVFFDPNDFKPEIVNSVKKQTGRELVIGDDLSWTFFPTVGINLGGISL 70

Query: 71  KNPQGFASPNLFKVESVGIDVSVMPLLDKQLKIGNIRLDGAEFHLETLKDGRSNLDALTQ 130
            NP+GF    + +V     +V +MPL  KQ++I  + LDGA+ +L T K+G S+LD LT 
Sbjct: 71  SNPEGFTPKAMLEVNKAVAEVELMPLFSKQIEIAQLSLDGAKINLVTRKNGSSSLDGLTG 130

Query: 131 AQSKPASAPATTDSAPASQPSSSEPAAAWSIELGGVSVSNAVLEITDKKAGSHTKLYDVQ 190
             ++  + PA        +PS+   A   SI++GGVS++N  + + D+  G    L   Q
Sbjct: 131 KGAEKTATPA--------EPSAK--AQLTSIDVGGVSITNTEINLIDEAKGQTQTLTLKQ 180

Query: 191 LSVAEFVPDNWTKATFAAKGDKDQQKFAAQGEAEVRLSADFKQYALRNINLDASFSDPSN 250
            ++  F  D +    +           +++GE +++LS DF Q  +  ++++        
Sbjct: 181 FTLGAFSLDKFAPMAYEFAATLPDMTVSSKGEGQIKLSHDFNQLVIEKLDIETQVE--GE 238

Query: 251 QIDSAKLKLDTFEFDKANALTFSVAGKAADMKLNAQGSASLMVNQAISKVGLDALKLQAE 310
            I + KL                     A++ LN+Q             + LD  +L A+
Sbjct: 239 GIPNKKL--------------------TAEVSLNSQ-------------IALDKKQLSAD 265

Query: 311 LEGAALPQSPMKLSLDSQIAFDLTQNHLSVLLNKLTANALSFDGKADVTLADIPKVRFNL 370
           +          KL+     A D+          KL  N   + GK     AD       L
Sbjct: 266 IS---------KLT-----AMDIN------AAGKLAVN---YGGKVPQINAD-------L 295

Query: 371 HSPEIDLDAFLGTKAQESQPAPAKEAAASSSSAPATNAPAEVEPDLSALKALDVAGEISI 430
              +IDLDA L            K+AAA+ S   A      VEPDL+AL  LD    +++
Sbjct: 296 QVGDIDLDALL-----PKSDTAEKQAAATPSQTQA------VEPDLTALNGLDAKLTLAV 344

Query: 431 DKFKASNAHLQNVKANFAVNRGVVDLKSFTANLYQGSVQASAQVDARKTPATYSVKKQIK 490
              K +N   QN   +  +  GVVDLK  TA+LYQG +  +AQVDAR   A+Y   KQI 
Sbjct: 345 KSIKVANLSTQNWLMDLGIKNGVVDLKQLTADLYQGKLMLNAQVDARSKVASYQFDKQIS 404

Query: 491 GVQVKPLLKDVLNNEMLEGTGNIDVNVQGQSLTPSGIQKNLVGTVAINFADGAVKGINVA 550
           GVQ++PLLKD    E+L GT N +V  +G+SL P  ++KNL+     +  DGA+ G+N+ 
Sbjct: 405 GVQIRPLLKDAAELEILAGTANFNVKGKGKSLIPEQLKKNLLANGRFDITDGALYGVNIP 464

Query: 551 HLIRTHYAKIKGQNVEEADAVKKTDFSAMTTTLKLNKGEVTTNDLNMQSPLLRIHGEGKA 610
            +IR+  AK+KG    +    +KTDFS++T    L  G  T  DL M SPLLR+ G+G A
Sbjct: 465 QMIRSAQAKLKGDMSADTKEERKTDFSSLTGNFSLENGVATNPDLAMSSPLLRVAGKGSA 524

Query: 611 NYLQQNVDFLVRTSIVGTLEGQGGKSLDELRDVTIPINISGAWSDPKFRLVFDDVLKQKA 670
           N L + +D+ + T++V +L+GQGG   D L  + IP+ I+G +  P++ L    +L  + 
Sbjct: 525 NLLTEGLDYRLTTTLVNSLKGQGGSEKDALAGIDIPLAITGTFQKPEYALDTQALLNNQL 584

Query: 671 KKEVDRGVEKLTDKI 685
           K+E D+  +KL D +
Sbjct: 585 KEETDKAKDKLKDSL 599