Pairwise Alignments

Query, 683 a.a., methionine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 680 a.a., methionyl-tRNA synthetase/methionyl-tRNA synthetase C-terminal region/beta chain from Pseudomonas stutzeri RCH2

 Score =  880 bits (2273), Expect = 0.0
 Identities = 428/683 (62%), Positives = 529/683 (77%), Gaps = 6/683 (0%)

Query: 3   NDPRKLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLK 62
           ++ R++LVT ALPYANGSIHLGHMLE+IQ D+WVR+Q+LRGN   ++CADDAHG+ IML+
Sbjct: 2   SEARQILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKLRGNQCIYVCADDAHGSAIMLR 61

Query: 63  AQQMGMTPEAMIEMVSEEHQRDFAGFDISFDNYHSTHSDENRELASHIYLQLKKNGFISS 122
           A++ G+TPE +I  V  EH  DFA F + FDN+HSTHS+ENRELA  IY +L+  G I++
Sbjct: 62  AEKEGITPEQLIANVQAEHSGDFADFLVDFDNFHSTHSEENRELAELIYTRLRDVGHIAT 121

Query: 123 RTISQLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGAT 182
           R+++Q FDPEK MFL DRF+KGTCPKC +EDQYGDNC+ CG TY PTEL +P+SA+SGAT
Sbjct: 122 RSVTQYFDPEKGMFLADRFIKGTCPKCAAEDQYGDNCEKCGATYEPTELKHPRSAISGAT 181

Query: 183 PVMKDSEHFFFDLPQFESMLKEWTRSGSLQSETANKMQEWFEGGLQQWDISRDAPYFGFE 242
           PV+KDS+HFFF LP FE+MLK+WTR G+LQ   ANK+ EW +GGLQ+WDISRDAPYFGFE
Sbjct: 182 PVLKDSKHFFFKLPDFEAMLKQWTRGGALQESVANKIAEWLDGGLQEWDISRDAPYFGFE 241

Query: 243 IPGEKDKFFYVWLDAPIGYMGSFKNLCDKRGDLDFNEYWNKDSKTELYHFIGKDIVYFHS 302
           IPGE  K+FYVWLDAPIGYM SF+NLC +R +L F+ +W+KDS  ELYHFIGKDI+ FH+
Sbjct: 242 IPGEPGKYFYVWLDAPIGYMASFENLCKRRPELSFDTFWSKDSTAELYHFIGKDIINFHT 301

Query: 303 LFWPAMLDGSGFRKPTNVFVHGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYAAK 362
           LFWPAML+G+GFRKPT V VHGY+TVNG KMSKS+GTF+KA TYL+HL+PE LRYYYA+K
Sbjct: 302 LFWPAMLEGAGFRKPTAVNVHGYLTVNGQKMSKSRGTFIKARTYLDHLNPEYLRYYYASK 361

Query: 363 LNNRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFDGKLSAHFAEPELYAEFA 422
           L   +DDLDLNLEDF Q+VN+D+V K+VN+ASR AGFI K   G +     EPEL+A F 
Sbjct: 362 LGRGVDDLDLNLEDFVQKVNSDLVGKVVNIASRCAGFIHKGNGGVMVDANPEPELWAAFQ 421

Query: 423 GAADRIAELFEAREFGRAIREITALADKANQYVDEKAPWVVAKQEGQDQALQDICTVGIN 482
            AA  IAE +EAR+F RA+REI ALAD+AN ++ +KAPW + K EG+   +Q+IC  G+N
Sbjct: 422 EAAPGIAEAYEARDFARAMREIMALADRANAWIADKAPWALNKVEGKQAEVQEICAFGVN 481

Query: 483 LFRVLMTYLKPVMPALAERTEAFLN-QELTWEGVATPLTDHAVTPFKALFNRIDPKQVEA 541
           LFR L+ +LKPV+P LA   E FLN + L W   AT L +H +  F  L  RI+P ++EA
Sbjct: 482 LFRQLVIFLKPVLPNLAAAAEQFLNVKPLRWNDHATLLANHQLNAFTPLMTRIEPAKIEA 541

Query: 542 MIEASKAEAAAEKAAADAAKPKSAETELSKDPLAAEIEFDDFAKVDLRIAKILSCEAVEK 601
           MIEASK + A+ +A+A  A       EL+K P+A EI FD FA VDLRIA I   E VE 
Sbjct: 542 MIEASKEDLASSEASAAPA----GNGELTKQPIATEINFDAFAAVDLRIALIEKAEFVEG 597

Query: 602 SDKLLKFELDIGGETRQVFSGIKSAY-QPEDLIGKYTVVVANLKPRKMKFGMSEGMILAA 660
           +DKLL+  LDIG   R VFSGIKSAY  P  L G+ T+ VANL PRKMKFGMSEGM+LAA
Sbjct: 598 ADKLLRLTLDIGDAKRNVFSGIKSAYPDPGKLEGRLTLYVANLAPRKMKFGMSEGMVLAA 657

Query: 661 GPGGSDLWLLEPHQGAQAGMRVM 683
           GPGGS+++LL P  GA+ G RVM
Sbjct: 658 GPGGSEIYLLSPDNGAKPGQRVM 680