Pairwise Alignments

Query, 683 a.a., methionine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 519 a.a., Methionyl-tRNA synthetase, class Ia (NCBI) from Rhodospirillum rubrum S1H

 Score =  167 bits (424), Expect = 9e-46
 Identities = 132/508 (25%), Positives = 217/508 (42%), Gaps = 43/508 (8%)

Query: 1   MANDPRKLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIM 60
           MA       +T  + Y N   H+GH    +  D+  R++RL G  V F+   D HG  + 
Sbjct: 1   MAGPKPPFYLTTPIYYVNDKPHIGHAYTTLACDVLARFKRLDGFDVKFLTGTDEHGQKVQ 60

Query: 61  LKAQQMGMTPEAMIEMVSEEHQRDFAGFDISFDNYHSTHSDENRELASHIYLQLKKNGFI 120
             A   G+ P+   + VS   +   A  + S D +  T    ++E    ++  L + G I
Sbjct: 61  KSATAAGIDPQTFTDRVSANFRDLAAAMNFSNDAFIRTTEPRHKEACKALWTLLVERGEI 120

Query: 121 SSRTISQLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDACGETYSPTELINPKSAVSG 180
                   +    E F               ED+     D  G   +PT          G
Sbjct: 121 YLDAYRGWYAVRDEAFY-------------GEDELTTAAD--GSRLAPT----------G 155

Query: 181 ATPVMKDSEHFFFDLPQFESMLKEW--TRSGSLQSET-ANKMQEWFEGGLQQWDISRDAP 237
           A     +   +FF L +++  L +    R   +  ++  N++  + +GGL    ISR   
Sbjct: 156 APVEWVEEPSYFFRLSKWQQPLLDLYAARPDFIAPDSRRNEVISFVKGGLTDLSISRTTF 215

Query: 238 YFGFEIPGEKDKFFYVWLDAPIGYMGSFKNLCDKRGDLDFNEYWNKDSKTELYHFIGKDI 297
            +G  +PG++D   YVWLDA   Y+ +     D+ G  D+  YW  +      H +GKDI
Sbjct: 216 SWGVPVPGDEDHVMYVWLDALTNYITAV-GFPDQTG--DYARYWPAN-----LHMVGKDI 267

Query: 298 VYFHSLFWPAMLDGSGFRKPTNVFVHGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRY 357
           + FH+++WPA L  +G   P  VF HG+ T  G K+SKS G  +     +     + +RY
Sbjct: 268 LRFHTVYWPAFLMAAGLEVPGRVFAHGWWTNEGQKISKSVGNVIDPRALIETYGLDPVRY 327

Query: 358 YYAAKLNNRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFDGKL--SAHFAEP 415
           +   ++    +D D +      R+N ++ N + NLA R    I K   G +     F+E 
Sbjct: 328 FLLREVPFG-NDGDFSHRAMINRMNGELANDLGNLAQRVLSMIAKNCAGAVPEPGPFSED 386

Query: 416 E--LYAEFAGAADRIAELFEAREFGRAIREITALADKANQYVDEKAPWVVAKQEGQDQAL 473
           +  L A      D++ +  + + F  A+  I  +   AN YVD +APW + K +    A 
Sbjct: 387 DDALLAAAVALLDKVRQAMDRQAFHEALEAIWVVIRAANGYVDRQAPWALRKNDPPRMA- 445

Query: 474 QDICTVGINLFRVLMTYLKPVMPALAER 501
             +  V   + R +   ++P +PA A R
Sbjct: 446 -TVLYVLAEVIRRVALLMQPFVPASAAR 472