Pairwise Alignments

Query, 683 a.a., methionine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 709 a.a., protein containing C-terminal region/beta chain of methionyl-tRNA synthetase from Dechlorosoma suillum PS

 Score =  802 bits (2072), Expect = 0.0
 Identities = 420/707 (59%), Positives = 507/707 (71%), Gaps = 31/707 (4%)

Query: 6   RKLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQ 65
           RK+LVT ALPYANGSIHLGH++E+IQ DIWVR+Q++RG+   ++CADD HGTPIML+AQ 
Sbjct: 3   RKILVTSALPYANGSIHLGHLVEYIQTDIWVRFQKMRGHDCWYVCADDTHGTPIMLRAQN 62

Query: 66  MGMTPEAMIEMVSEEHQRDFAGFDISFDNYHSTHSDENRELASHIYLQLKKNGFISSRTI 125
            G+TPEA+IE V  EH RDFAGF + FDNY+ST++ E R  A  IY +L+  G I  R+I
Sbjct: 63  EGITPEALIERVYGEHTRDFAGFLVGFDNYYSTNTPETRRCAEDIYGKLQAAGLIEVRSI 122

Query: 126 SQLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATPVM 185
            Q +DP KEMFLPDRF+KG CPKC ++DQYGDNC+ CG  Y+P +L +P SAVSGA P M
Sbjct: 123 EQFYDPVKEMFLPDRFIKGECPKCGAKDQYGDNCEVCGAAYTPNDLKDPYSAVSGAKPEM 182

Query: 186 KDSEHFFFDL--PQFESMLKEWTR-SGSLQSETANKMQEWF----EGGLQQWDISRDAPY 238
           + S+H+FF L  P+ +  L+ WTR  G LQ E ANKMQEW     E  L  WDISRDAPY
Sbjct: 183 RSSDHYFFKLSDPRCQDFLRRWTREEGRLQPEAANKMQEWLGAEGENRLTDWDISRDAPY 242

Query: 239 FGFEIPGEKDKFFYVWLDAPIGYMGSFKNLCDKRGDLDFNEYWNKDSKTELYHFIGKDIV 298
           FGFEIPG   K+FYVWLDAPIGYMGSF NLC+K+G LDFNEYW KDS+ ELYHFIGKDI+
Sbjct: 243 FGFEIPGAPGKYFYVWLDAPIGYMGSFANLCEKKG-LDFNEYWAKDSQAELYHFIGKDIL 301

Query: 299 YFHSLFWPAMLDGSGFRKPTNVFVHGYVTVNGAKMSKSKGTFVKASTYLNH-LDPECLRY 357
           YFH+LFWPA L+ +GFR PT VF HG++TV+G KMSKS+GTF+ A +YL   L+PE LRY
Sbjct: 302 YFHALFWPAELEQAGFRTPTKVFAHGFLTVDGQKMSKSRGTFITAESYLRQGLNPEWLRY 361

Query: 358 YYAAKLNNRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFDGKLSAHFAEPEL 417
           Y+AAKL N ++D+DL+L DFT RVN+D+V K VN+ASR AGFI KRF+G+L+        
Sbjct: 362 YFAAKLTNTLEDIDLSLPDFTARVNSDLVGKYVNIASRAAGFIAKRFNGQLAVADQSLAP 421

Query: 418 YAEFAGAADRIAELFEAREFGRAIREITALADKANQYVDEKAPWVVAKQEGQDQALQDIC 477
           YA    AA RIAE +E REFGRA+REI ALAD  NQYVD   PW +AKQEGQD AL   C
Sbjct: 422 YAAIREAAPRIAEYYENREFGRALREIMALADGVNQYVDTVKPWELAKQEGQDAALHAAC 481

Query: 478 TVGINLFRVLMTYLKPVMPALAERTEAFLN-QELTWEGV-ATPLTDHAVTPFKALFNRID 535
           T  +NLFR+L   LKPV+P LA++  AFLN     W+ V A     HA+ P++ L  RID
Sbjct: 482 TNALNLFRLLTVLLKPVLPVLADKVAAFLNVAPFAWDDVNAVLAAGHAIQPYEHLMTRID 541

Query: 536 PKQVEAMIEASKAEAAAEKAAADA-AKPKSAE-----------TELSKDPLAAE----IE 579
           PK VEA++EA+KA  A    AA A A  K AE            E      AAE    I 
Sbjct: 542 PKLVEALVEANKASLAPAVTAAPAKAAEKGAEHSQQRHAEKQQKEAQVAQAAAETGPHIS 601

Query: 580 FDDFAKVDLRIAKILSCEAVEKSDKLLKFELDIGGE-TRQVFSGIKSAYQPEDLIGKYTV 638
            DDF KVDLRIAKI+    VE +DKL++ +LDIG E  RQVF+GIKSAY P  L+G+ TV
Sbjct: 602 IDDFMKVDLRIAKIVDASHVEGADKLIRLQLDIGEEKPRQVFAGIKSAYDPAALVGRLTV 661

Query: 639 VVANLKPRKMKFGMSEGMILAAG-PGG--SDLWLLEPHQGAQAGMRV 682
           +VANL PRKMKFGMSEGM+LAA  P G    L++L P  GAQ GMRV
Sbjct: 662 MVANLAPRKMKFGMSEGMVLAASDPEGKTGGLYILSPDAGAQPGMRV 708