Pairwise Alignments

Query, 683 a.a., methionine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 657 a.a., methionyl-tRNA synthetase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  241 bits (615), Expect = 8e-68
 Identities = 193/681 (28%), Positives = 298/681 (43%), Gaps = 77/681 (11%)

Query: 7   KLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQM 66
           +  +T  + Y N   HLGH    I AD   R+ RL G    F+   D HG  I+  A++ 
Sbjct: 3   RFYITTPIYYVNAKPHLGHAYTTIVADSLRRFHRLLGKDTYFLTGTDEHGDKIVQAAEKA 62

Query: 67  GMTPEAMIEMVSEEHQRDFAGFDISFDNYHSTHSDENRELASHIYLQLKKNGFISSRTIS 126
           G +P+  ++ VS + +  +    + +D +  T   E+++    +  ++  +G I      
Sbjct: 63  GCSPQEFVDGVSTQFRDLWPHLGVEYDQFIRTTDAEHKKCVQDVLQKVYDSGDIYF---- 118

Query: 127 QLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDN-CDACGETYSPTELINPKSAVSGATPVM 185
                                      +YG + C  C   Y+  EL N         P  
Sbjct: 119 --------------------------GEYGGHYCYGCERFYTEKELENGLCPQHQVKPEY 152

Query: 186 KDSEHFFFDLPQFESMLKEWT-------RSGSLQSETANKMQEWFEGGLQQWDISRDAPY 238
              +++FF + +++  L+++        R    +SE    +     G L+   ISR    
Sbjct: 153 ISEKNYFFRMSKYQGWLRQYILDNPDFIRPERYRSEVLGILDS---GALEDLCISRPKSR 209

Query: 239 --FGFEIPGEKDKFFYVWLDAPIGYMGSFKNLCDKRGDLDFNEYWNKDSKTELYHFIGKD 296
             +G E+P +KD   YVW DA I Y+ +     D++    F  +W       + H + KD
Sbjct: 210 LTWGIELPFDKDYVCYVWFDALINYISALGWPDDEK----FGRFW-----PGVQHLVAKD 260

Query: 297 IVYFHSLFWPAMLDGSGFRKPTNVFVHGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLR 356
           I+  H++FWP ML  +G     N+ VHGY  V   KMSKS G  V   + ++       R
Sbjct: 261 ILKPHAVFWPTMLKAAGLEPYNNLNVHGYWLVRDTKMSKSLGNVVDPLSMIDKYGLSAFR 320

Query: 357 YYYAAKLNNRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFDGKLSAH---FA 413
           Y+   +++    D   + +    R+NAD+ N + NL SR      K F G + A      
Sbjct: 321 YFLLREMHFG-SDASFSEDALVARLNADLANDLGNLFSRVLSMTAKYFGGVVPAQGPLTE 379

Query: 414 EPELYAEFAGAADR-IAELFEAREFGRAIREITALADKANQYVDEKAPWVVAKQEGQDQA 472
           E E     A  A R    LFE   F  A+  +  L    N+YVD  APW + KQ G  + 
Sbjct: 380 EDEAIRTLAEEAQRNYVRLFERVRFSNALESLWELVRALNRYVDHAAPWTLFKQ-GDTER 438

Query: 473 LQDICTVGINLFRVLMTYLKPVMPALAERTEAFLNQEL------------TWEGVATPLT 520
           L  +  V +   R +  +L PVMP  +      L Q L             W G+A   T
Sbjct: 439 LGTVMYVMLECMRKVAVHLWPVMPEASTVLLGQLGQTLDPATVQLADEADRWGGLAAGTT 498

Query: 521 DHAVTPFKALFNRIDPKQVEAMIEASKAEAAAEKAAADA-AKPKSAETELSKDPLAAEIE 579
              V     LF R++ ++VE    A       +KAAA A A  +SA      +P  A IE
Sbjct: 499 ---VASSSNLFPRVELEKVEESKPAKAEGKKKDKAAASAQAAAQSAAPAAGDEP--ATIE 553

Query: 580 FDDFAKVDLRIAKILSCEAVEKSDKLLKFELDIG-GETRQVFSGIKSAYQPEDLIGKYTV 638
           F DF K+D+R   ++  E    +DKLL+ E+D+G    RQ+ +G+   + P+ L+G+   
Sbjct: 554 FTDFQKLDIRFGTVVVVERHPNADKLLRVEVDLGEAAPRQIVAGLAEYFTPDFLLGRQVA 613

Query: 639 VVANLKPRKMKFGMSEGMILA 659
           VVANL PRK++   S+GMILA
Sbjct: 614 VVANLAPRKLRGLESQGMILA 634