Pairwise Alignments

Query, 683 a.a., methionine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 572 a.a., methionyl-tRNA synthetase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  239 bits (610), Expect = 3e-67
 Identities = 175/570 (30%), Positives = 273/570 (47%), Gaps = 39/570 (6%)

Query: 7   KLLVTCALPYANGSIHLGHML-EHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQQ 65
           ++L+T A+PY NG  HLG+++   + AD++ RY R RG+ V FICA D HGTP  L A +
Sbjct: 3   RILITSAIPYINGIKHLGNLVGSQLPADLYARYARARGHEVMFICATDEHGTPAELAAAK 62

Query: 66  MGMTPEAMIEMVSEEH--QRDFAG-FDISFDNYHSTHSDENRELASHIYLQLKKNGFISS 122
            G   + + E  +E H  Q D A  F +SFD++  + S+ N+ L  +   +L +NG I  
Sbjct: 63  AG---KPVAEYCAEMHAVQSDIAKRFGLSFDHFGRSSSERNKALTQYFAGKLAENGLIEE 119

Query: 123 RTISQLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGAT 182
            +  Q++      FLPDR+++GTCP C  +   GD C+ C +   PT+LI+P+SA+SG+T
Sbjct: 120 VSEKQVYSHADGRFLPDRYIEGTCPNCGYDKARGDQCENCTKQLDPTDLIDPRSAISGST 179

Query: 183 PV-MKDSEHFFFDLPQFESMLKEWTRSGS-LQSETANKMQEWFE--GGLQQWDISRDAPY 238
            + +++++H +      +  L  W  S +     T +  ++W     GLQ   I+RD  +
Sbjct: 180 DLEVRETKHLYLRQSALKDQLDAWIDSKTDWPILTTSIAKKWLHDGDGLQDRGITRDLDW 239

Query: 239 FGFEI-------PGEKDKFFYVWLDAPIGYMGSFKNLCDKRG--DLDFNEYWNKD---SK 286
            G  +       PG + K FYVW DAPI Y+       D  G  D  +  +W  D    +
Sbjct: 240 -GVPVKKGTEDWPGMEGKVFYVWFDAPIEYIAGTAEWADANGLDDAAWERWWRTDKGADE 298

Query: 287 TELYHFIGKDIVYFHSLFWPAMLDGSG--FRKPTNVFVHGYVTVNGAKMSKSKGTFVKAS 344
                F+GKD V FH+L +PA + GSG  ++    +    Y+T +G + S S+G  V   
Sbjct: 299 VRYVQFMGKDNVPFHTLSFPATIMGSGDPWKLVDYIKSFNYLTYDGGQFSTSQGRGVFMD 358

Query: 345 TYLNHLDPECLRYYYAAKLNNRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRF 404
             L  L  +  R++  +       D +   E+F   VN D+ + + N ASR   F   ++
Sbjct: 359 QALEILPADYWRWWLLSHAPEN-SDSEFTWENFQASVNKDLADVLGNFASRVTKFCRSKY 417

Query: 405 DGKLSAHF----AEPELYAEFAGAADRIAELFEAREFGRAIREITALADKANQYVDEKAP 460
             ++ A      AE  L AE            +A E  +A  E+ A+    N+Y+   AP
Sbjct: 418 GEEVPAGGAYGPAEEALIAELTTKLRAYEGHMDAMEVRKAAAELRAIWVAGNEYLQAAAP 477

Query: 461 WVVAKQEGQDQALQDICTVGINLFRVLMTYLKPVMP-ALAERTEAFLNQELTW-----EG 514
           W V K +    A   I  +G+NL R      +P +P A A    A   ++  W     E 
Sbjct: 478 WSVFKTD--PDAAAAIIRLGLNLVRFYAVLSQPFIPDASAALLRAMKAEDAGWPGDVAEA 535

Query: 515 VATPLTDHAVTPFKALFNRIDPKQVEAMIE 544
           +A     HA    +  F +I     EA  E
Sbjct: 536 LAALPAGHAFAVPEVTFAKISDADREAWAE 565